| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2956 |
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| Symbol | |
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| ID | 4581523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 124897 |
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| End bp | 126003 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639770283 |
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| Product | carboxynorspermidine decarboxylase |
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| Protein accession | YP_916736 |
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| Protein GI | 119385681 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.64779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATC TGCAGACGCC CTATTACCTG ATCGACCTCG CCCGGCTGCG GGAGAACATG
GAGCGAATCC GCTATCTGCG CGAACGCTCG GGCGCGAAAT GCCTCCTGGC GCTGAAATGC
TTCGCCACCT GGTCGGCCTT CGACTTCATG CGCGACTTCA TGGACGGCAC CACCTCCTCC
TCGCTGTTCG AGCTGCGGCT GGGGCATGAG GAATTCGGCA AGGAAACCCA TGCCTATTCC
GTCGCCTGGG CCGATCACGA GATCGACGAG GCGCTGGGTT ACGCCGACAA GATCATCTTC
AACAGCCTGG GCCAGCTCGA CCGCTTCGGC GCCAGGGCGG CCCAGCGCGG CATCGCCATG
GGGCTGCGGC TGAACCCGCG CTTCTCGACC AGCGGCTTCG ACCTGGCCGA CCCGGCCCGG
CCCTTCTCGC GCCTGGGCGA ATGGGACCTG AACCGGCTGG AACAGGCGCT CGACCGCATC
TCGGGCGTGA TGATCCACTA CAATTGCGAG AATGCCGATT TCGAGCTGTT CGACGCACAG
CTTGCCCGGA TCGAGACCGA GTTCGGCGGC TTCCTGGAAA GGCTCGACTG GGTTTCCCTT
GGCGGCGGCA TCCATTTCAC CGGCGAAGGC TATCCGCTGG ACCGTCTTGC CGACCGGCTC
AGGGCGTTCT CGGAACGCTT CGGCGTGCAG GTCTTCCTGG AACCGGGCGA GGCCAGCATC
ACCCGCTCGA CCTCGCTGGA GGTCACGGTG CTGGACGTGA TCCATCACGG CAAGGACGTG
GCCATCGTGG ACAGCAGCAT CGAGGCGCAT ATGCTCGACC TGCTGATCTA TCGCGAGACG
GCGAAGCTGC CGCAGGACGG CGAGCATCCC TGGCAGATCG CCGGCAAGAC CTGCCTGGCC
GGCGACATCT TCGGCGAGGG CCGCTTCGCG CAGCCGCTGA AGGTGGGCGA CCGGCTCAGC
ATCGCCGATG CCGGCGGCTA CACCATGGTC AAGAAGAACT GGTTCAACGG CGTCCCCATG
CCCGCGATCG CGATCCGGGA CGAGGACGGA ACGATCCACG AGGTTCGCCG GTTCACCTAT
GACGACTACA AAGCCAGCCT GTCCTGA
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| Protein sequence | MSDLQTPYYL IDLARLRENM ERIRYLRERS GAKCLLALKC FATWSAFDFM RDFMDGTTSS
SLFELRLGHE EFGKETHAYS VAWADHEIDE ALGYADKIIF NSLGQLDRFG ARAAQRGIAM
GLRLNPRFST SGFDLADPAR PFSRLGEWDL NRLEQALDRI SGVMIHYNCE NADFELFDAQ
LARIETEFGG FLERLDWVSL GGGIHFTGEG YPLDRLADRL RAFSERFGVQ VFLEPGEASI
TRSTSLEVTV LDVIHHGKDV AIVDSSIEAH MLDLLIYRET AKLPQDGEHP WQIAGKTCLA
GDIFGEGRFA QPLKVGDRLS IADAGGYTMV KKNWFNGVPM PAIAIRDEDG TIHEVRRFTY
DDYKASLS
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