| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2941 |
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| Symbol | |
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| ID | 4581508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 105290 |
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| End bp | 106483 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639770268 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_916721 |
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| Protein GI | 119385666 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.224778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGA GACTTTCTCC CGGCGTCTGC GCCGGGCTTG TGCTTTGCTG CCTGATGGCG
GCCGCCCCGG CGGCGGCGCA GCAATTGCCG CCGCCGCAGG TCAGCGTGCA GGAAATGACG
CCCGAGGCGC TGCCGGTGGT GAACGAATTG CCCGGCCGCG TGGCCGCGAC CCGCACCGCC
GAGGTGCGGC CGCGCGTCGG CGGCATCGTG ATCGAGCGCG TCTTCGAGCA GGGCGGCAAG
GTCGAGGCGG GCGATGTGCT TTACCGCATC GACCCCGCCC CCTATGACGT GCGCGTCGCC
AGCGCCGAGG GCGCGCTGGC CCGGGCCGAG GCCACGGCGC TGAACGCCGC CGACCAGGAA
AAGCGTGCCC GCGCCCTGCG CGAGCGCAAG GTGACGGCGG GGGTCGACCT GGACAATGCC
GCCACCGCGC TGGCCCAGGC CCAGGCGGAT GTGGCCATCG CCCGCGCCTC GCTGCAGGAG
GCGCAGCTGA ACCGTTCCTA TACCGAGGTC GCGGCGCCCA TCGCCGGCGT GGTCGGCCGG
GCGCTGGTGA CCGAGGGCGC GCTGGTCAAC GCCCAGACCG ACATCATGGC GACGATCCAG
CAGCTCGACC CGGTCTATGT GGACTTCACC CAGTCCTCGT CCGAACTGTT CGCGTTGCGC
CGGGCCCTGG CGGCGGGGCA ACTGGCCATG ATCTCGGCCG ACGCGGCGGC GGTGCGGCTG
ATCTTCGACG ACGGCAGCGA ATATGCCCAT CCCGGCAAGC TGCTGTTTTC CGAGGCGAGC
GTGGACAGCT CGACCGGGCA GATCACGCTG CGCGCCGAGT TCCCGAACCC CGAGGGCGAC
CTGCTGCCCG GGCTTTACGT CCGGGTGCGG ATCGAGCAGG CGGTGCGCGA CAACGCCCTG
ACCGTGCCGC AGATGGCGGT GCAGCGCGAC CAGTCGGGCC AGGCCTATGT CTATGCGCTG
AAGGATGCCG ACACGGTCGA GCGCCGCGAC GTGACGCTGG GCCAGACCGC CGGCAACCGC
TGGCTGGTGG AAAGCGGGCT GAAGCCGGGC GACCGGGTCG TGGTCGCCGG AGCGCAGAAG
CTTTACCCCG ACGCCAAGGT GGTGCCGCAG CCTGTGGACG CGGCCCAGCC GGCGGTGCCG
GCCGGTGCCG CCGCGGCGGC CGAAGCGCCC GCCCCGGCGC CTGCGCAGGA GTAG
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| Protein sequence | MTMRLSPGVC AGLVLCCLMA AAPAAAQQLP PPQVSVQEMT PEALPVVNEL PGRVAATRTA
EVRPRVGGIV IERVFEQGGK VEAGDVLYRI DPAPYDVRVA SAEGALARAE ATALNAADQE
KRARALRERK VTAGVDLDNA ATALAQAQAD VAIARASLQE AQLNRSYTEV AAPIAGVVGR
ALVTEGALVN AQTDIMATIQ QLDPVYVDFT QSSSELFALR RALAAGQLAM ISADAAAVRL
IFDDGSEYAH PGKLLFSEAS VDSSTGQITL RAEFPNPEGD LLPGLYVRVR IEQAVRDNAL
TVPQMAVQRD QSGQAYVYAL KDADTVERRD VTLGQTAGNR WLVESGLKPG DRVVVAGAQK
LYPDAKVVPQ PVDAAQPAVP AGAAAAAEAP APAPAQE
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