Gene Pden_2929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2929 
Symbol 
ID4581496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp92529 
End bp93302 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content70% 
IMG OID639770256 
ProductGntR domain-containing protein 
Protein accessionYP_916709 
Protein GI119385654 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.532881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCG AAGTGAACAA GGGAGCCCCT GCCGCGGAAA CCACCGCCCG GCACATCGAG 
GACCTGATTC TCGAAGGCTC GCTGCGCCCC GGCGACCCCT TGCTGCCCGA GCGCGAGATG
GCGCTGCGGC TGAACGTCTC GCGCCCGACC TTGCGGCAGG GCATCCGCAT GCTGGAGGAG
AGGGGGCTGA TCGTCGCCGA TCCGGGCGGC GGGCGGCGGG TGGCGCCGCT GGCCACCAGC
ATCACCGATC CGCTGATCGA GCTGATGGCC TCGCGCGGGG AGGTGGTGGA CGACTATCTG
GAACTGCGCG GCACGCTGGA GGGCATGGCG GCGAGCCTGG CCGCGACGCG GGCGAGCGAC
GTGGACCGCG CGACGCTGAC CCGCTGCATG GAGCGCATCG ACCTGGCCCA TGACGAGGCG
GATTTCCGCG ACGAGGCCGA GGCGGATGTC GACCTGCATG TCGCGGTCTA CGAGGCCAGC
CACAACGTCG TGCTGCTGCA GATCATGCGG GCGCTGTCGG GCATGCTGCG CAAGGGCGTG
TTCCACAACC GCGAAAAGCT GTATGCCCGG CCCGAGGTGC GCGACGTGCT GCGCGCCCAG
CACCGCGCCA TCTATGACGC GATCATGGTC CGCGACCCCG AGGCGGCGGC CCGCGCCGCC
CAGGACCACA TGACCTATAC CAAGCGCGTG CGCGCCGAGA TCATTGCCGC CGAGGCGCGG
CTGGAAATCT CGTTGCGGCG GATCGAGGGC GGCAGCCTGA CCGCGCGGAA CTGA
 
Protein sequence
MPSEVNKGAP AAETTARHIE DLILEGSLRP GDPLLPEREM ALRLNVSRPT LRQGIRMLEE 
RGLIVADPGG GRRVAPLATS ITDPLIELMA SRGEVVDDYL ELRGTLEGMA ASLAATRASD
VDRATLTRCM ERIDLAHDEA DFRDEAEADV DLHVAVYEAS HNVVLLQIMR ALSGMLRKGV
FHNREKLYAR PEVRDVLRAQ HRAIYDAIMV RDPEAAARAA QDHMTYTKRV RAEIIAAEAR
LEISLRRIEG GSLTARN