Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2929 |
Symbol | |
ID | 4581496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 92529 |
End bp | 93302 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639770256 |
Product | GntR domain-containing protein |
Protein accession | YP_916709 |
Protein GI | 119385654 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.532881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCG AAGTGAACAA GGGAGCCCCT GCCGCGGAAA CCACCGCCCG GCACATCGAG GACCTGATTC TCGAAGGCTC GCTGCGCCCC GGCGACCCCT TGCTGCCCGA GCGCGAGATG GCGCTGCGGC TGAACGTCTC GCGCCCGACC TTGCGGCAGG GCATCCGCAT GCTGGAGGAG AGGGGGCTGA TCGTCGCCGA TCCGGGCGGC GGGCGGCGGG TGGCGCCGCT GGCCACCAGC ATCACCGATC CGCTGATCGA GCTGATGGCC TCGCGCGGGG AGGTGGTGGA CGACTATCTG GAACTGCGCG GCACGCTGGA GGGCATGGCG GCGAGCCTGG CCGCGACGCG GGCGAGCGAC GTGGACCGCG CGACGCTGAC CCGCTGCATG GAGCGCATCG ACCTGGCCCA TGACGAGGCG GATTTCCGCG ACGAGGCCGA GGCGGATGTC GACCTGCATG TCGCGGTCTA CGAGGCCAGC CACAACGTCG TGCTGCTGCA GATCATGCGG GCGCTGTCGG GCATGCTGCG CAAGGGCGTG TTCCACAACC GCGAAAAGCT GTATGCCCGG CCCGAGGTGC GCGACGTGCT GCGCGCCCAG CACCGCGCCA TCTATGACGC GATCATGGTC CGCGACCCCG AGGCGGCGGC CCGCGCCGCC CAGGACCACA TGACCTATAC CAAGCGCGTG CGCGCCGAGA TCATTGCCGC CGAGGCGCGG CTGGAAATCT CGTTGCGGCG GATCGAGGGC GGCAGCCTGA CCGCGCGGAA CTGA
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Protein sequence | MPSEVNKGAP AAETTARHIE DLILEGSLRP GDPLLPEREM ALRLNVSRPT LRQGIRMLEE RGLIVADPGG GRRVAPLATS ITDPLIELMA SRGEVVDDYL ELRGTLEGMA ASLAATRASD VDRATLTRCM ERIDLAHDEA DFRDEAEADV DLHVAVYEAS HNVVLLQIMR ALSGMLRKGV FHNREKLYAR PEVRDVLRAQ HRAIYDAIMV RDPEAAARAA QDHMTYTKRV RAEIIAAEAR LEISLRRIEG GSLTARN
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