Gene Pden_2920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2920 
Symbol 
ID4581487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp83228 
End bp83836 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content72% 
IMG OID639770247 
Producthypothetical protein 
Protein accessionYP_916700 
Protein GI119385645 
COG category[S] Function unknown 
COG ID[COG2830] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0786757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.632979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCGG AATGGCTGCG CCGGGAAGGA GCGCCGGAGC TGATCGTGGT GCTGACCGGC 
TGGGCGGTCG GGGCGGGGCC GTTCCGGCAT CTGGCCGGGC CGGCCGACGT GCTGGTGCTG
TCGGATTACC GCGACCTGTC CGCGCCGGAC TGGCCCCAGG GCTACGCGGC GACGGATCTG
GTCGCCTGGT CCTTCGGCGT GGCGGCGGCC TGCCGGCTGC CCGCGCTGGA CGGGTTTCGC
CGCAAGGTGG CGGTCTGCGG CTCGTGGGCG CCCTGCGACG ACGAACTGGG GATACCGTGC
GAGACGGTGC GGGCCACGGC GGCGAACCTG TCCGAACTAT CGCTGCGGCA ATTCGCGCGG
CGGGCGGAAT GCCCCACGGA GCCGGGCGCC GATCCTGCCG CGCTGGGCGA GGAATTGCGG
GCGGTGATGG GCTGGGGCGG CGTGCAGGCG CCGGATTTCG ACCGCATCGT GCTGGGCGCC
TCGGACCGCA TCTTTCCGCT GAAGAACCTG ATCCGCGCCT GGCAGGCATG GCCGGTCGAG
ACCCGGGTGC TGGATTGCGG GCACAACCCC TTTGCGCTGT GGCGCGACTG GGACGAGGTG
CTGGCATGA
 
Protein sequence
MRAEWLRREG APELIVVLTG WAVGAGPFRH LAGPADVLVL SDYRDLSAPD WPQGYAATDL 
VAWSFGVAAA CRLPALDGFR RKVAVCGSWA PCDDELGIPC ETVRATAANL SELSLRQFAR
RAECPTEPGA DPAALGEELR AVMGWGGVQA PDFDRIVLGA SDRIFPLKNL IRAWQAWPVE
TRVLDCGHNP FALWRDWDEV LA