Gene Pden_2876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2876 
Symbol 
ID4581463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp42697 
End bp43251 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content68% 
IMG OID639770203 
ProductF0F1 ATP synthase subunit B 
Protein accessionYP_916656 
Protein GI119385601 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.627654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC TGAGCGTTCT CTTTGCCCTG GTGGCGAGCC CGGCGCTCGC GGCTTCAGGT 
CCGTTCTTCT CGCTGCGCAA TACCGACTTC ATCGTCACGC TGGCCTTCCT GCTGTTCGTC
GGCATCCTGG TCTATTTCCG CGTGCCGCAG ATCGTCGGCG GCCTGCTGGA CAAGCGGGCC
GAGGGCATCC GCAACGATCT GGCCGAGGCC CGCCGCCTGC GCGAGGAAGC GCAGGAGATC
TATGCGAGCT ATGAGCGCCG CCAGCGCGAG GTGAAGTCGC AGGCCGACGA CATCGTCGCC
AATGCCAAGC GCGAGGCGGT CGCGGAAGCC GAGAAGGCCA AGAAGGCGCT GCAACTGTCG
ATCGAGCGGC GCCTGAAGGC CGCCGAGGAG CAGATCGCCG GTGCCGAGGC CGAGGCGGTG
CGCGCGGTGC GCGACCGCGC CATCCAGACC GCGATCGCCG CCGCGACCGA GATCCTGGGC
AAGCAGGCCA GCCCGGCCGA GCGCAGCGCC GGTATCGACA AGGCCATCGA CGAAGTGGCC
CAGCGGCTGA ACTGA
 
Protein sequence
MKRLSVLFAL VASPALAASG PFFSLRNTDF IVTLAFLLFV GILVYFRVPQ IVGGLLDKRA 
EGIRNDLAEA RRLREEAQEI YASYERRQRE VKSQADDIVA NAKREAVAEA EKAKKALQLS
IERRLKAAEE QIAGAEAEAV RAVRDRAIQT AIAAATEILG KQASPAERSA GIDKAIDEVA
QRLN