| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2865 |
|---|
| Symbol | |
|---|
| ID | 4581452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 31607 |
|---|
| End bp | 32110 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639770192 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_916645 |
|---|
| Protein GI | 119385590 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.218944 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCTGCCG GTTTCGGACT GCTACCATTC CGCCTGCACG CCAAGCAGGA GGCCAGGGGC
ATGAGCGAAC CGTTGCCGGA GGACGAGCTG GAACAACGCC GGCGCATCGC GCGCCAGTTC
ATCGAGGTGA TCCCCCATGC CCGGGCGCTT GGCATGCGGC TGGACCAGCT GTCGCCCGAG
GGGGCCGAGA TCTCGTTGCC CTGGCGCGAG GACCTGGTCG GCGATCCGCG CAGCGGGGTG
ATCCACGGCG GGGTGATCTC GGCCTTGATG GACACATGCA GCGGCGCGGC GGTGATGGCG
CATCCGGCCG GCGCGCGTTC GACCGCGACC ATCGACCTGC GCATCGACTA CATGCGCGCG
GCGACGCCCG GCCAGACCAT CCGCGCCCGG GCGAATTGCT ATCACATCAC CCGCTCGGTC
GCCTTCGTGC GCGCCTGGGC GATGGATGAC GACGAATCCC GCCCCGTGGC CTCGGCCACC
GGGGCCTTTA CGGTCGAGCG CTGA
|
|---|
| Protein sequence | MPAGFGLLPF RLHAKQEARG MSEPLPEDEL EQRRRIARQF IEVIPHARAL GMRLDQLSPE
GAEISLPWRE DLVGDPRSGV IHGGVISALM DTCSGAAVMA HPAGARSTAT IDLRIDYMRA
ATPGQTIRAR ANCYHITRSV AFVRAWAMDD DESRPVASAT GAFTVER
|
|---|
| |