| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2829 |
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| Symbol | |
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| ID | 4581160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2846194 |
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| End bp | 2848656 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639770156 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_916609 |
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| Protein GI | 119385553 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.500302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.743867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCCCGA CATTTGGCCG TGGAGCGATG ACCAACTCCT GGACCGACAT CAAGAATACC
GACCTCGTTG TCGTCATGGG CGGCAATGCC GCCGAAGCGC ATCCCTGCGG CTTCAAATGG
GTGACCGAAG CCAAGGCCAC GCGCGGCGCC AGGCTGATCG TGGTGGATCC GCGCTTTACC
CGCACGGCTT CGGTAGCCGA CTATTATGCG CCGATCCGGC CCGGTTCGGA CATCGTCTTC
CTGATGGCGA TGATCAACTG GCTGATCCAG AACGACAAGG TGCAGTGGGA CTATGTGAAG
AACTTCACCA ACGCCCCCCT GATCGTGAAG GACGAATACG GCTGGAGCGA CGGGCTGTTC
ACCGGCTACG ACCCGGAAAA GCGCGATTAT GACAAGTCGA GCTGGGACTA CGTGATCGGC
GAGGACGGCT TTGCCGCCGT GGACATGGCG CTGGAGCATC CGCGCTGCGT CTGGAGCCTG
CTCAAGGAGC ATGTCTCGCG CTATACGCCC GAACTGGTCG AGGAGGTTTG CGGCACGCCC
AGGGATCGCT TCCTGAAAAT CGCCGAGATG ATCGGCGAAT GCTCGGCGCC CGACAAGACC
ATGACCTCGA TGTATGCGCT TGGCTGGACC CAGCACTCGA AAGGGGCGCA GAACATCCGC
GGCATGGCGA TGCTGCAGCT GATCCTGGGC AATATCGGCG TCCGGGGCGG CGGGATGAAC
GCGCTGCGGG GCCATTCCAA CATCCAGGGC CTGACCGATA TCGGGCTGAT GTCGAACCTG
ATCCCCGGCT ATCTGAACAT CCCGACCGAG AAAGAGCCGG ACTGGCAGAC CTACATGTCC
AGCCGCAGCT TCAAGCCGCT GCGTCCGGGC CAGACCAGCT ATTGGCAGAA CTATCCCAAG
TTCATGGTCA GCTTCATGAA GGCGATGTGG GGCGACGCCG CCACGGCCGA GAACGACTGG
GCCTATCACT ACCTGCCCAA GCTGGACGTG CCGACCTATG ACATCCTGCG CATGTTCGAG
CTGATGAATG CGGGACAGGT GAACCTGTAT TTCTGCCAGG GCTTCAACCC GCTCCTGTCC
TTTCCGAACC GGGCCAAGGT CACGGAGGCG CTCAGCAAGC TGAAGCTTCT GGTGGTCATG
GACCCGCTTG AGACCGAGAC GGCGCATTTC TGGGAAAACC ACGGCGAGCA CAACGACGTG
GACACCGCCT CGATCCAGAC CGAAGTGCTG GAACTGCCCT CGTCCTGCTT TGCCGAGGAC
GACGGCGCGC TGGTCAATTC GGGGCGCTGG CTGCAATGGC ACTGGTCGGC GGCGACCCCG
CCCGGCCAGG CCAGGCATGA CACCTGGATC ATGGCGCAGA TCTTCCTGCG GGTGAAAAAG
CTCTATCAGG AAGAAGGCGG CGTGTTCCCC GACCCGATCC TGAACCTGAC CTGGAACTAT
GCCGATCCCG ACGAGCCCTC GCCCGAGGAA CTGGCCAAGG AGATGAACGG CCGGGCGCTG
GAGGATGTCT ACGACACCGC CGACCCGACG AAACTGCTGA CCGCCAGGGG CAAGCAGCTT
CTGAACTTCA GCCAGTATCG CGACGACGGC TCGACCATGG GCGCCTGCTG GATCTATTCC
GGCTGCTGGA ACGAGGACGG CAACAACATG GCCCGCCGGG ACAATGCCGA CCCCGACGAG
ACCGGCGCCT ATCCGAACTG GACCTTTTCC TGGCCGCTGA ACCGGCGGAT TCTCTACAAT
CGGGCCTCGG CGGATATGCA GGGCCGGCCC TGGGATCCCT CTCGCAAGCT GCTGGAATGG
GATGGCGAGA AATGGACCGG CTACGACGTG CCCGACATCG CGCCCACGGC CAAGCCCGGC
GATGTCGGTC CGTTCATCAT GAACCAGGAG GGCGTCTCGC GCCTGTTCAC GCGGGGCATG
ATGCGCGACG GTCCCTTCCC GACGCATATG GAGCCGTTCG AGTCGCCCAT CGCCAACGTG
TTCAACCCGC AGATGCGCGG CAACCCGGTG GCGCGGGTCT TTGCCAGCGA TGCCGAGCAA
TTCGCCACCA GCGAGGAATT CCCGATCGCG GCGACCTCGT ATCGCCTGAC CGAGCATTTC
CACTACTGGA CCAAGCACAA CCGCATCAAC GCGGCCTTGC AGCCCGAGTT CTTCGTCGAG
ATCAGCGAAG AGCTGGCCGC CGAAAAGGGC ATCCGGCGAG GCGGCTGGGT GCGGGTCTGG
TCCAAGCGGG GCGAGGTCAA GGCCAAGGCG TTGGTGACCG GCCGGCTGAA GCCGATGCAA
TGCGGCGACA AGCTGGTGCA TGTCATCGGC ATCCCGCTGC ATTGGGGCTT CATGGGTGCG
GCGCGCAAGG GGTTCGGGCC GAACAGCCTG ACGCCCTTTG TCGGCGACGC CAATGTGGAA
ACGCCTGAAT TCAAGGCGTT CCTGGTCAAT ATCGAACCCG CGACAGGGGA GGCCGTGTCA
TGA
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| Protein sequence | MGPTFGRGAM TNSWTDIKNT DLVVVMGGNA AEAHPCGFKW VTEAKATRGA RLIVVDPRFT
RTASVADYYA PIRPGSDIVF LMAMINWLIQ NDKVQWDYVK NFTNAPLIVK DEYGWSDGLF
TGYDPEKRDY DKSSWDYVIG EDGFAAVDMA LEHPRCVWSL LKEHVSRYTP ELVEEVCGTP
RDRFLKIAEM IGECSAPDKT MTSMYALGWT QHSKGAQNIR GMAMLQLILG NIGVRGGGMN
ALRGHSNIQG LTDIGLMSNL IPGYLNIPTE KEPDWQTYMS SRSFKPLRPG QTSYWQNYPK
FMVSFMKAMW GDAATAENDW AYHYLPKLDV PTYDILRMFE LMNAGQVNLY FCQGFNPLLS
FPNRAKVTEA LSKLKLLVVM DPLETETAHF WENHGEHNDV DTASIQTEVL ELPSSCFAED
DGALVNSGRW LQWHWSAATP PGQARHDTWI MAQIFLRVKK LYQEEGGVFP DPILNLTWNY
ADPDEPSPEE LAKEMNGRAL EDVYDTADPT KLLTARGKQL LNFSQYRDDG STMGACWIYS
GCWNEDGNNM ARRDNADPDE TGAYPNWTFS WPLNRRILYN RASADMQGRP WDPSRKLLEW
DGEKWTGYDV PDIAPTAKPG DVGPFIMNQE GVSRLFTRGM MRDGPFPTHM EPFESPIANV
FNPQMRGNPV ARVFASDAEQ FATSEEFPIA ATSYRLTEHF HYWTKHNRIN AALQPEFFVE
ISEELAAEKG IRRGGWVRVW SKRGEVKAKA LVTGRLKPMQ CGDKLVHVIG IPLHWGFMGA
ARKGFGPNSL TPFVGDANVE TPEFKAFLVN IEPATGEAVS
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