Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2754 |
Symbol | |
ID | 4580389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2772733 |
End bp | 2773470 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639770080 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_916534 |
Protein GI | 119385478 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA TCCTGATCAC CGGCGGCGGC AGCGGTATCG GCCGGCTGAC CGCCCGGCGG TTCCTGGAGG CCGGCTGGCG CGTCGGGCTG ATCGGCCGGC GCGAGGCGGC CTTGGCCGAG ACGGCGGCGG GCCACCCGGA TGCGCTGGTC CTGCCTTGCG ACGTGACGGA CGAGGCGGCG GTCGATGCCG CCTTTGCCCG CGCGGTGGCG GAATGGGGAC GGCTGGACGT GCTGTTCAAC AATGCCGGCG CCATCCTGAT CTCGCGCCTG ATCGACGAGA TTTCCTGGCA GGAATGGCGC GACATCGCCG GGGTGAACAT CGACGGCATG TTCCTGTGCG CCCGCGCCGC CTTTCGCCAG ATGCGGCGGC AGCAGCCGAT GGGCGGGCGG ATCATCAACA ACGGCTCGAT CGCGGCCGAG GCACCGCGTC CCGGCTCGGT GCCCTATACG GTCTCGAAAC ATGCGGTGAC GGGGTTGACG CGGACGCTGG CGCTGGACGG CCGCCCCTAT AACATCGCCT GCGGCCAGAT CGACGCCGGC AATGCCGCGA CCGAGATGAT ATCGGCCGTG GCGACGCAGG GCGCGCCGCA GGCCGACGGC TCGATCCGGC CCGAGCCGGT GATGGATGCG GCGAACGTGG CCGAGGCGGT GCTGCACATG GCCAGCCTGC CCGAAGGCGC CAACGTGCTA CATATGACGG TGATGGCGAC CAACATGCCC TTTGTCGGGC GCGGCTGA
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Protein sequence | MKTILITGGG SGIGRLTARR FLEAGWRVGL IGRREAALAE TAAGHPDALV LPCDVTDEAA VDAAFARAVA EWGRLDVLFN NAGAILISRL IDEISWQEWR DIAGVNIDGM FLCARAAFRQ MRRQQPMGGR IINNGSIAAE APRPGSVPYT VSKHAVTGLT RTLALDGRPY NIACGQIDAG NAATEMISAV ATQGAPQADG SIRPEPVMDA ANVAEAVLHM ASLPEGANVL HMTVMATNMP FVGRG
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