Gene Pden_2754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2754 
Symbol 
ID4580389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2772733 
End bp2773470 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID639770080 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_916534 
Protein GI119385478 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA TCCTGATCAC CGGCGGCGGC AGCGGTATCG GCCGGCTGAC CGCCCGGCGG 
TTCCTGGAGG CCGGCTGGCG CGTCGGGCTG ATCGGCCGGC GCGAGGCGGC CTTGGCCGAG
ACGGCGGCGG GCCACCCGGA TGCGCTGGTC CTGCCTTGCG ACGTGACGGA CGAGGCGGCG
GTCGATGCCG CCTTTGCCCG CGCGGTGGCG GAATGGGGAC GGCTGGACGT GCTGTTCAAC
AATGCCGGCG CCATCCTGAT CTCGCGCCTG ATCGACGAGA TTTCCTGGCA GGAATGGCGC
GACATCGCCG GGGTGAACAT CGACGGCATG TTCCTGTGCG CCCGCGCCGC CTTTCGCCAG
ATGCGGCGGC AGCAGCCGAT GGGCGGGCGG ATCATCAACA ACGGCTCGAT CGCGGCCGAG
GCACCGCGTC CCGGCTCGGT GCCCTATACG GTCTCGAAAC ATGCGGTGAC GGGGTTGACG
CGGACGCTGG CGCTGGACGG CCGCCCCTAT AACATCGCCT GCGGCCAGAT CGACGCCGGC
AATGCCGCGA CCGAGATGAT ATCGGCCGTG GCGACGCAGG GCGCGCCGCA GGCCGACGGC
TCGATCCGGC CCGAGCCGGT GATGGATGCG GCGAACGTGG CCGAGGCGGT GCTGCACATG
GCCAGCCTGC CCGAAGGCGC CAACGTGCTA CATATGACGG TGATGGCGAC CAACATGCCC
TTTGTCGGGC GCGGCTGA
 
Protein sequence
MKTILITGGG SGIGRLTARR FLEAGWRVGL IGRREAALAE TAAGHPDALV LPCDVTDEAA 
VDAAFARAVA EWGRLDVLFN NAGAILISRL IDEISWQEWR DIAGVNIDGM FLCARAAFRQ
MRRQQPMGGR IINNGSIAAE APRPGSVPYT VSKHAVTGLT RTLALDGRPY NIACGQIDAG
NAATEMISAV ATQGAPQADG SIRPEPVMDA ANVAEAVLHM ASLPEGANVL HMTVMATNMP
FVGRG