| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2738 |
|---|
| Symbol | |
|---|
| ID | 4580373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 2755866 |
|---|
| End bp | 2759369 |
|---|
| Gene Length | 3504 bp |
|---|
| Protein Length | 1167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639770064 |
|---|
| Product | chromosome segregation protein SMC |
|---|
| Protein accession | YP_916518 |
|---|
| Protein GI | 119385462 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGGCCCA GGATCGCCAA AAATCCGGGG GATTTGAACG ATCTTCGTGG ACCCTTCGCA
TTGCGCTTTG ACCGCCTGCG CCTCAATGGT TTCAAAAGCT TCGTGGACCC GACCGACCTG
GTCATCCACG AGGGCCTGAC CGGCGTGGTC GGCCCGAACG GCTGCGGCAA GTCGAACCTG
CTCGAGGCGC TGCGCTGGGT TATGGGCGAA AACCGGCCCA CCGCCATGCG CGGCGAGGGG
ATGGAGGACG TGATCTTTGC CGGCACCGCG CGGCGTTCCG CCCGCGCCCA TGCCGAGGTC
ACGCTGACCA TCGACAACAA GGCCCGCCTC GCCCCCGCCG GCATGAACGA CAGCGATGCG
CTGGACATCA CCCGTCGCAT CACCCGCGAC GCCGGCAGCG CCTATCGCAT CAACGGCAAG
GAGGTGCGGG CGCGCGACGT GCAGATGCTG TTCGCGGATG CCTCGACCGG GGCGCATTCG
CCGGCGCTGG TGCGGCAGGG GCAGATTTCC GAACTGATCA ATGCCAAGCC CAAGGCGCGG
CGGCGGGTGC TGGAAGAGGC GGCGGGGATT TCCGGCCTCT ACCAGCGCCG GCACGAGGCC
GAGTTGAAGC TGAACGCGGC CGAGGCGAAC CTGACGCGGG TCGACGACAC GCTGGACCAG
CTTTCCACGC AGGCGGCCAG CCTTGCGCGG CAGGCCCGTG CCGCGGCGCG CTATCGCGAG
ATCGGCGCCG CGCTGCGCCG GGCCGAGGGC GTGCTGCTTT ATCGCCGTTG GGCCGAGGCC
GATCAGGCCA AGGCAGCCAC GGCCGAAGCG CTGCGTGCGG CGATCCGCGC CGCTGCCGAG
GCCGAGGCAG AGGCCCGCCG CGCCATCGCC GCCCGCGAGG AGGCCGAGGC GAAGCTGCCG
CCCCTGCGCG AGGAAGAACA GGTCGCCGCC GCCATCCTGT CGCGCGCCAC CGTCGAGCGC
GAGGCGCTGG ACGAGGCCGA GGCCCGCGCC GGCCAGGCCA TCCAGACGCT TCTGGCGCGG
ATCGCCCAGC TCGACCGCGA CATCGAGCGC GAATCGGCGC TGAACCGCGA TGCCGGCGAG
GTGATCGAGC GGCTGGAATG GGAACGGCGC GAACTGGAAA AGGCTGGGCA GGGCCATGAG
GAACGGTTGG ACGCAGCCGG CAATACCGCC GAGGAAGCCG CCGAGGCCCT GCGCGAGGTC
GAGGCCAAGC TGGCCGAGTT GACCGACGAA TCCGCCCGTC TTGCCGCCCG CCACCAATCC
GCCGAGCGGC TGGTCCATGA CCTGCGGCAG ATGCAGGAGC GCGCCACCCG TGCCGCGCAT
GATGCCGAGG CTGCGGCCGC CCGCGCCACC GAAGCCGGTG CCGAGGCCGA TGCCGCCCGC
GAAGCCGCCG AGGAAGCGCA GGAGGAAGCC CGCGAGCGCG TCGAGGCTGC CGAGGAGGCG
TTGGCCGACG CCGAGGAAGC CCGCGCCGCG CTGGAGACCG AGGAATCCGC CGCCCGTGCG
GCGAGGGCCG AGGCCGAGGG CGAGGTCTCG GCGCTGAGTG CCGAGATGGC GGCGCTGAAG
CGGTTGGTGG AGCGCGGGCA GGGCGGCGAT TCGATCCTTG ACCTGGTGCG GGTCGCGCGC
GGCTACGAGG CGGCTTTCGG TGCGGCGCTG GGCGACGATC TGGGCGTCGG GCTGGCCGGC
GACGGTTCGG GCTGGCACCT GCTGCCGGCC TATGGCTCGC CGCAGCCGCT GCCTGAGGGC
GCCGCTCCGC TGTCGCCGCA TGTCGAGGCG CCCGAGGCGC TGGCCCGCCG GCTGTCGCAG
GTCGGGCTGG TCGCGGATGC GGCGATGGGC GCGGCGATGC AACCGGCGCT GGCCCCCGGC
CAGCGGCTGG TCACGCAGGC GGGTGACCTG TTTCGTTGGG ACGGCATGCG GGTGATGGCG
GGCGAGGCGG CGTCCTCGGC CGCGCTGCAT CTGCAAAAGG TCAACCAGCT TGCCGAACTG
ACCGAACAGG CCGAGGCGGC GCAGGCCCGT GCCGGGGATG CGCAGGCCGC GCATCAGGCG
CTGCGCGACC GCCACCTGGC CGCGACCGAG GCCGAAAAGC GCGCCCGCGA CGCAAGGCGC
GAGGCCGAGC GCGGGCTGTC CGACGCCGTG CGCGCCGTGA CCCGGGCCGA ATCCGAGCTT
TCCATGGCGC AAAGCCGCGC CGAATCCGCC CGCGCCGAAC TGGCCCGGCA TCGCGAGGAT
GCACTGGACG CACGTGCCCG GCTGACCGAG GCCGAGCGGG TGCTGGCCGA ACTGCCCGAC
CGCGGCGCAG CGGCAGCGGC GCTGGAACAT GCCCGCACCG GGGTCGAGGC GGCGCGCATC
GCCACCCTGA CCAGGCGTGG TGCGCTGGAC GAGCTGCGGC GCGAGGCGAA TGCGCGGACC
AGGCGCCTGC AAGAGATCGC CAAGGAGGAA TCCGGCTGGC GGCTGCGGCT GGATCAGGCC
GGAACCCGTG CTGCCGAACT CGCCGCCCGC CGCGAGCAGG CCGCGGAGGA TCTGGAGGAA
GCCGAGGCCC AGCCCGAGAT CCTGGCCGAG CGTCGCGGCG TTCTGACCGA GGCCGAGGCG
CAGGCCGCCG CCCGCCTGTC CCGCGCCCGC GATGCGCTGT CGGCCGCCGA TCAGGCGCTG
CGCATCGCCG CCGAGACCGA GCGCGAGGCC GAGCGCGCGG CATCCGACGC GCGCGAGACC
CGCGCCGCCC GCGAGGCCCG CGCCGAGGCT GCGACCGAGG CCGAATCCAC TGCCCGGCTG
CGCATCCACG AAGAGCTTGA GGCCACGCCC GAGGCGCTGC TGGAATCTCT GGGCGAGGTC
GAGGAGATCG CTCCCGAGGC GCTGGAGGAC CAGATCGCCC GGCTGCGCCA GCAACGCGAC
GCGCTGGGCG CGGTCAACCT GCGTGCCGAC GAGGACAAGC GCGAGCTTGA GACCGAGCGC
GACCGGCTGG CGACCGAGAA AGAGGACCTG ACCGAGGCGA TCCGCAAGCT GCGCCAGGGC
ATCGGCAGCC TGAACCGCGA GGGACGCGAG CGCTTGCTGG CCGCCTTCGA CACGGTGAAC
GCCAATTTCA CCACGCTGTT CACGCATCTT TTCGGGGGCG GCGAGGCGCG GCTGGTGCTG
GTCGAATCCG ACGACCCGCT GGAGGCGGGG CTGGAGATCA TGTGCCAGCC TCCGGGCAAA
AAGCTCAGCA CGCTCAGCCT TTTGTCGGGT GGCGAGCAGA CGCTGACGGC GTTGGCGCTG
ATCTTTGCGG TCTTCCTTGC CAATCCGGCG CCGATCTGCG TGCTGGACGA GGTGGACGCG
CCGCTCGACG ATGCCAACGT CACCCGGTTC TGCGACCTGA TGGACGAGAT GACCCGGCGG
ACCGAGACGC GCTTTCTTGT GATCACGCAC CATGCCGTCA CCATGTCGCG CATGGACCGG
CTGTTCGGCG TGACCATGGT CGAACAGGGC GTCAGCCAGT TGGTCAGCGT CGATCTGAAA
CGCGCGGAAG CTCTGGTGGC CTGA
|
|---|
| Protein sequence | MRPRIAKNPG DLNDLRGPFA LRFDRLRLNG FKSFVDPTDL VIHEGLTGVV GPNGCGKSNL
LEALRWVMGE NRPTAMRGEG MEDVIFAGTA RRSARAHAEV TLTIDNKARL APAGMNDSDA
LDITRRITRD AGSAYRINGK EVRARDVQML FADASTGAHS PALVRQGQIS ELINAKPKAR
RRVLEEAAGI SGLYQRRHEA ELKLNAAEAN LTRVDDTLDQ LSTQAASLAR QARAAARYRE
IGAALRRAEG VLLYRRWAEA DQAKAATAEA LRAAIRAAAE AEAEARRAIA AREEAEAKLP
PLREEEQVAA AILSRATVER EALDEAEARA GQAIQTLLAR IAQLDRDIER ESALNRDAGE
VIERLEWERR ELEKAGQGHE ERLDAAGNTA EEAAEALREV EAKLAELTDE SARLAARHQS
AERLVHDLRQ MQERATRAAH DAEAAAARAT EAGAEADAAR EAAEEAQEEA RERVEAAEEA
LADAEEARAA LETEESAARA ARAEAEGEVS ALSAEMAALK RLVERGQGGD SILDLVRVAR
GYEAAFGAAL GDDLGVGLAG DGSGWHLLPA YGSPQPLPEG AAPLSPHVEA PEALARRLSQ
VGLVADAAMG AAMQPALAPG QRLVTQAGDL FRWDGMRVMA GEAASSAALH LQKVNQLAEL
TEQAEAAQAR AGDAQAAHQA LRDRHLAATE AEKRARDARR EAERGLSDAV RAVTRAESEL
SMAQSRAESA RAELARHRED ALDARARLTE AERVLAELPD RGAAAAALEH ARTGVEAARI
ATLTRRGALD ELRREANART RRLQEIAKEE SGWRLRLDQA GTRAAELAAR REQAAEDLEE
AEAQPEILAE RRGVLTEAEA QAAARLSRAR DALSAADQAL RIAAETEREA ERAASDARET
RAAREARAEA ATEAESTARL RIHEELEATP EALLESLGEV EEIAPEALED QIARLRQQRD
ALGAVNLRAD EDKRELETER DRLATEKEDL TEAIRKLRQG IGSLNREGRE RLLAAFDTVN
ANFTTLFTHL FGGGEARLVL VESDDPLEAG LEIMCQPPGK KLSTLSLLSG GEQTLTALAL
IFAVFLANPA PICVLDEVDA PLDDANVTRF CDLMDEMTRR TETRFLVITH HAVTMSRMDR
LFGVTMVEQG VSQLVSVDLK RAEALVA
|
|---|
| |