Gene Pden_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2709 
Symbol 
ID4580344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2724389 
End bp2725444 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content70% 
IMG OID639770035 
ProductNAD(P) transhydrogenase subunit alpha 
Protein accessionYP_916489 
Protein GI119385433 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0686] Alanine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCATC TCTGGGTCCG CACGGAAAGC CGCGCCAACG AACGGCGGGT CGGCATTACT 
CCTGCGGGTG TGCGCGAGTT GATCGCGCAG GGCTTCCACG TCACGGTCGA GGAAAGCCCG
CATCGCATCC TGCCCATCGC CGATTACGCC GCAGCCGGGG CCGAGATCGC GCCCGAAGGC
GCCTGGCCGG GTGCCCCGGC CGAGGCCGTC ATCTTCGGCC TCAAGGAACT GCCCGAGGAC
GGCACGCCCC TGTCGCATCG CCACATCATG TTCGGCCATG CCTACAAGGG CCAGCCGGCC
GGGCTGGCGC TGCTGCGCCG CTTTCGCGAA GGCGGCGGCA CGCTTTACGA TCTGGAATAC
CTGACCGACA GCGACGGCCG CAGGCTGGCG GCATTCGGCT ATTGGGCCGG TTTCGCAGGG
GCTGCGGTCA CGCTGAAAGC CTGGGCGACG CAGCGACAGG GGGGCATCTG CGCGCCGGTC
GCCGGCTGGC CATCGCAAGA GGCGATGCAG GACGAGTTGC GGGCCGAGCT GGACGCGACC
GGCGCGCCGC GACCACATGC CATCGTGATC GGCGCGCTGG GACGGGTCGG CGGCGGTGCC
TCGGACCTGC TGGCAGCAAT GGGGGTGCGG GTCACGAAAT GGGACATGGC CGAGACCGCC
AGCGGCGGCC CGTTCCCCGA GATCCTGGCG CATGAACTGT TCATCAACTG CATCCTGGCC
GGGCCACGAA CCCCGGTCTT CGTGCCGCCC GAGGCGGTCG ATCCCGGTCG GCGGCTGAGG
GTGATCGGCG ATGTCGCCTG CGATCCCTCC AGCGATTTCA ACCCGGTCAA GGTCTATGAC
CGCGCGACCA ACTGGGCCGA GCCGGTGATC CGCGTCGCCG ATCATCCGCC GCTGGACGTG
ATGGCGATCG ACAATCTGCC CTCGCTGCTG CCGCGCGAAA GCGCGCTGGA CTATGCCGGG
CAGCTGCTGC CGGTGCTGAA AGGCCTGGAC CGCATCGACG AGGGGGCATG GGGCCGGGCG
CGGGCGACCT TCCAGGACCA CCTCTCGGCG CTGTGA
 
Protein sequence
MVHLWVRTES RANERRVGIT PAGVRELIAQ GFHVTVEESP HRILPIADYA AAGAEIAPEG 
AWPGAPAEAV IFGLKELPED GTPLSHRHIM FGHAYKGQPA GLALLRRFRE GGGTLYDLEY
LTDSDGRRLA AFGYWAGFAG AAVTLKAWAT QRQGGICAPV AGWPSQEAMQ DELRAELDAT
GAPRPHAIVI GALGRVGGGA SDLLAAMGVR VTKWDMAETA SGGPFPEILA HELFINCILA
GPRTPVFVPP EAVDPGRRLR VIGDVACDPS SDFNPVKVYD RATNWAEPVI RVADHPPLDV
MAIDNLPSLL PRESALDYAG QLLPVLKGLD RIDEGAWGRA RATFQDHLSA L