Gene Pden_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2708 
Symbol 
ID4580343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2723518 
End bp2724366 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content73% 
IMG OID639770034 
ProductNLP/P60 protein 
Protein accessionYP_916488 
Protein GI119385432 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAC CCGACCGCCG CCTGACGCCG GCGACCGAGC GTATTGCGCT GGACTGCCTG 
CGCGGCATCC TGCAGCGCCC GGCCTATACC CCCGGCCAGC CGGTGCGGCT GGCGGTGCCG
CTGGCCGACC TGTGCCGTGC GCCCGGAGGC GCCCGCGACC GTCAGTTGAA TTTCGGCGCG
GATCTTGTGC TGCTGGAACA GGTGGATGGC TGGGCCTTCG TGCAGGCGGC GGCGGATGGC
TATTGCGGCT GGGTCCGGGC CGAAGGGCTG GACGGGCAGA TGCCCGCGAT CACCCATCGC
GTCAGCGCCC CCGCCACCCA TGTCTATGCC GAGCCGAACA TGAAGACGCC CGAGTCGATG
CGCCTGTCGT TGGGTGCGCG GCTGTCGGTC ATCGCCATGC AGGACGGTTT CGCCCGGCTG
GCGCAGGGCG GCTGGGTGCC GGCCCAGCAT ATCTCGGACC GGCCCGAGCG CGATCCCGCC
ACGGTGGCCG AGCGTTTCCT GGGCACGCCT TATCTGTGGG GCGGCAACAG CCGCTGCGGC
ATCGACTGCT CGGGTCTGGC GCAGGCGGCG CTGGCGGCCT GCGCCGTGCC CTGCCCCGGC
GACAGCGACC TGCAAGAGGC CGCCTTCGCC CCGGCCGACG ACCGGGTCCG CCGCAACGAC
CTGCTGTTCT GGCCCGGCCA TGTCGCCCTG GCGCTGGACG GCGAGCGCAT GGTCCACGCC
ACTGCCTTCG CCATGGCGGT GATCGTCGAG CCTATCGCCC AGGCCATCGC CCGCATCGAC
GCCGCCGGGC AAGGGCCGTT TCGCGGCGCG CGGCGGCCCT CGCTTGCCGC GCAGGCCCGG
TTTCCCTAG
 
Protein sequence
MTAPDRRLTP ATERIALDCL RGILQRPAYT PGQPVRLAVP LADLCRAPGG ARDRQLNFGA 
DLVLLEQVDG WAFVQAAADG YCGWVRAEGL DGQMPAITHR VSAPATHVYA EPNMKTPESM
RLSLGARLSV IAMQDGFARL AQGGWVPAQH ISDRPERDPA TVAERFLGTP YLWGGNSRCG
IDCSGLAQAA LAACAVPCPG DSDLQEAAFA PADDRVRRND LLFWPGHVAL ALDGERMVHA
TAFAMAVIVE PIAQAIARID AAGQGPFRGA RRPSLAAQAR FP