Gene Pden_2683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2683 
Symbol 
ID4581228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2700753 
End bp2701202 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content65% 
IMG OID639770012 
Producthistidine triad (HIT) protein 
Protein accessionYP_916466 
Protein GI119385410 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACG ATTGCCTGTT CTGCCGCATC GCACGCGGCG AATTGCCGGC GCACCGGGTC 
CATGAGGACG ACGAGATCCT GGCCTTTCTG GATCTGCATC CCATCCGCCC CGGCCATTGC
CTGATCATCC CCAAGCGGCA TTATCCCTGG TTCGAGGACC TGCCCGAAGA TCTTGCCACC
CGGATCACCT CCTGGGCGCA GCGCCTCGCC CGGCAGATGA AGACGATCTA CGCGGTCGAG
CGGGTGGCGC TGTTCTATAC CGGCATCCAT GTCGCCCATG CCCATGCGCA TGTCGTCCCG
ATGCATCATG TGCACGACGT CTCGTCCCAG GCCTATCTGC AGGACGGCAT CGGCAGCTTT
TCGGCGCCGC CGCAACTGCC GGCCGAAGAG GGCGCCCGGA TCGCCCAGGT GCTGGCCCCA
GCCTTCGCAG GACAGGATGC CGCGCCGTAG
 
Protein sequence
MSDDCLFCRI ARGELPAHRV HEDDEILAFL DLHPIRPGHC LIIPKRHYPW FEDLPEDLAT 
RITSWAQRLA RQMKTIYAVE RVALFYTGIH VAHAHAHVVP MHHVHDVSSQ AYLQDGIGSF
SAPPQLPAEE GARIAQVLAP AFAGQDAAP