| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2669 |
|---|
| Symbol | |
|---|
| ID | 4581214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 2679482 |
|---|
| End bp | 2680078 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639769998 |
|---|
| Product | outer membrane lipoprotein carrier protein LolA |
|---|
| Protein accession | YP_916452 |
|---|
| Protein GI | 119385396 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.560514 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.919804 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA AAACGCTCGC CCTTGCGCCC GTCCTGTGCC TGGCCATGGC CTTTCCCGCC
CTGGCCGAAA AGATCTCGCT GAACGAGATC TCGCGCTATC TCAACAGCCT GAAGACCGCC
AAGGCGGATT TCACCCAGGT GAATGCCGAC GGCTCGATCT CGACCGGGAT CGTCTATATC
CAGCGCCCGC AGCGGGTGCG CTTCGAATAC AAGGGCGACC GCACGCTGGT CATGGCCTCG
GCCGGGAACG TCGCGGTGTT CGACGGCAAG ACGCGCGGCG CGCCGCAGCA ATATCCGCTG
TCCAAGACGC CGCTGTCGCT GATCCTGGCG CCGAATATCG ACCTGAGCCG CGCGCGCATG
GTCACCGGCT ATACCGAGAA GAAGAACACC ACCGTCGTCA CGGCGCAGGA TCCCCAGCAC
CCGGAATACG GCAATATCCA GATGGTCTTT ACCGCCAACC CGACGCAGCT GCGGCAATGG
GTGGTGACCG ACGACACCGG CAAGCGCACC ACGGTGATCC TGGGCGACAT GCAGACGGGA
ATGTCCTTCC CGGCCTCGAC CTTCGCCATC CAGAACGAGA TCGCCCGCCG GAAATAG
|
|---|
| Protein sequence | MKLKTLALAP VLCLAMAFPA LAEKISLNEI SRYLNSLKTA KADFTQVNAD GSISTGIVYI
QRPQRVRFEY KGDRTLVMAS AGNVAVFDGK TRGAPQQYPL SKTPLSLILA PNIDLSRARM
VTGYTEKKNT TVVTAQDPQH PEYGNIQMVF TANPTQLRQW VVTDDTGKRT TVILGDMQTG
MSFPASTFAI QNEIARRK
|
|---|
| |