Gene Pden_2661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2661 
Symbol 
ID4581206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2672358 
End bp2673491 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content72% 
IMG OID639769990 
Productbeta-lactamase 
Protein accessionYP_916444 
Protein GI119385388 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.220174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCT CTGTCAGCAT TGCCGCGCTG GACCGTGCCG TCGACAATGC ACTGTCCGAG 
CGGCGGATCG TCGGCTGCGT GGTGCTGCTG GCCGAGGATG GCCGGCTGGT CCATGCCCGC
GCCGAGGGCC TTGCCGACCG CGAGGCAGGC CGGCCGATGG CCCAGAACAC CTGGCTGCGC
TATGCCTCGG TCTCAAAGCC CTTCACCACG GTCGCGGCGC TACGGCTGAT GCAGGCGGGC
CGGCTCGCGC CCGAGGATCC GGTGACGCGC TGGCTGCCGG ATTTCACCCC CGCGCTGCCC
GACGGCAGCC GCCCCGCGAT CACCGTGGAC CAGCTGATGT CGCATCTGGC GGGGCTGGAC
TATGGCTTCA ACCAGCCCGA GGACGGCCCC TATGCCCGCG CCGGGGTCTC GGACGGGATC
GGCGACAGCG GCATCTCGCT GGCCGAGAAC CTGCGCCGCA TCGCCTCGGT GCCGCTGGAC
CGGCCGCCCG GCACGCGCTG GCGCTATTCG GTAGCGACCG ACGTGCTGGG CGCAGTGATC
CAGTCGGCGG CCGACATGCC GCTGCCCCAG GCCATGGCCG AGTTGGTGAC CGACCCCCTG
GGCATCGAGG CCGGTTTTCA CGCCCCGGAC TCCGCCGACC TGGCCGCGAA CTACGCCGAT
GCCCGCCCCC AGCCGCAGCG GATGCGCGGC CCGACCCGGG TCAGGAACCC GCTGCAGCCC
GAGCAGAGCT ATGCCTACCT GCCCGAGCGC ATCCGCGACC CCTTGGCCTA TCCCTCGGGC
GGCGGTGGCA TGGCGGGCAC GGCCAAGGCC GCGCTGGCGC TGCTGGAAAC CCTGCGCGAC
GGCTCTTTCC TGGGCGAAAG CCTGCGTGCC GAGGCGCAAC GCAACCGCAT CCGCCAGCGT
CACCCGCTGC GCGGGCCCGG CTGGGGCCAT GCCTGGGCGG GCGCGGTCAT CACCGATGCC
GAAGCGGCCG GTATCGGCCT GCCGCAAGGC TGCCTCAGCT GGGGCGGCAT CTACGGCCAC
AGCTGGATCG TCGATCCCGC CCGCCGCCGC AGCCTGGTCG CGCTGACCAA TACCGCGGTC
GAAGGCATGA ACGGCGCCTT TGCGGTGGAA ATCGCCGCCG CAGCCGCGCT ATGA
 
Protein sequence
MSLSVSIAAL DRAVDNALSE RRIVGCVVLL AEDGRLVHAR AEGLADREAG RPMAQNTWLR 
YASVSKPFTT VAALRLMQAG RLAPEDPVTR WLPDFTPALP DGSRPAITVD QLMSHLAGLD
YGFNQPEDGP YARAGVSDGI GDSGISLAEN LRRIASVPLD RPPGTRWRYS VATDVLGAVI
QSAADMPLPQ AMAELVTDPL GIEAGFHAPD SADLAANYAD ARPQPQRMRG PTRVRNPLQP
EQSYAYLPER IRDPLAYPSG GGGMAGTAKA ALALLETLRD GSFLGESLRA EAQRNRIRQR
HPLRGPGWGH AWAGAVITDA EAAGIGLPQG CLSWGGIYGH SWIVDPARRR SLVALTNTAV
EGMNGAFAVE IAAAAAL