| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2656 |
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| Symbol | |
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| ID | 4581201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2666082 |
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| End bp | 2668454 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639769985 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_916439 |
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| Protein GI | 119385383 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.343812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCT TACCTGTCCA CGGAACAGCC GGAAGGGAAT GGAATGGGCA CGCTCTACGA
AGCCTTGATG CTGATACTCG ACGTCGTCTG GTTCGTGATG ATCGCCCATA TCATCATGTC
ATGGCTGATC AACTTCCAGG TGCTGAACCT GCGCCAGCCG CTGATCTGGC AGGTCTGGAA
CGGGCTCAAC CGCCTGCTGG AGCCGATCTA CGGCCCCGTC CGCTCGATCC TGCCGAACAC
GGGCGGGCTG GACCTGGCGC CGCTGGTCGT CTTTATCGGC ATCATCATCC TGCAACGCGC
GCTCGCCAAC AACGCGGCCT GGTTCTACGG CTTCTAGGCA TGTCGGCCGC GCCCCTATTG
CGGCAGGTCT TCGGCTTCGA CGCCTTTCGG CCGGGGCAGG AAGAGATCGT CGATGCCGTG
GCCGCCGGCC GCGACGTGCT GGCGATCATG CCGACCGGCG GGGGCAAGTC GCTGTGCTAC
CAGCTGCCGG CGCTGATGCG GGACGGGCTG ACGGTGGTCA TATCGCCGCT GATCGCCCTG
ATGCGCGACC AGGTCCGGGC GCTGACCGAG GCGGGCGTCG CCGCCGCCGC CCTGACCAGC
GGCAATTCGG ACGAGGAAAA CAGCGAGGTT CTGCGGGCGC TGAACGCACG GGAATTGCGG
CTGCTCTACA TGGCGCCCGA GCGGCTGGCC TCGGGTGCGA CCATTCCGAT GCTGCGCCGC
GCGGGCGTCC AGGCCATCGC CGTGGACGAG GCGCATTGCG TCAGCCAATG GGGCCATGAC
TTCCGTCCCG ATTACCTGCG CGTGGGCGAG TTGCGCCGGA CGCTTTCCGT GCCGCTGGCC
GCCTTTACCG CCACCGCCGA TGCCGAGACC CGCGAGGAAA TCGTCAAGCG CTTGTTCGAC
GGTGCGCAGC CGCAAAGCTT CCTGCGCGGT TTCGACCGGC CGAACATCCA CCTGGCCTTC
CAGCCCAAGG ACGGGCCGCG CCGGCAGATC CTGGATTTCG CCGCCGCGCG CCGGGGCCAG
TCGGGCATCG TCTATTGCGG CACCCGCGCC AAGACCGAGA CGCTGGCCGG TGCGCTGAAC
GAGGCCGGGC TTGCCGCCGT CGCCTATCAC GGCGGCATGG AGCCCGACCA GCGCCGCAAG
GTCGAGGCGC GGTTCCAGCG CGAGGACGGG CTGATCGTGG TGGCGACCGT GGCCTTCGGC
ATGGGCATCG ACAAGCCCGA CATCCGCTGG GTCGCCCATG CCGACCTGCC GAAATCCATC
GAGGCCTATT ACCAAGAGAT CGGCCGCGGC GGCCGCGACG GTGCCCCGGC CGAGACGCTG
ACGCTTTACG GCCCTGACGA CATCCGCCTG CGCCGCGGCC AGATCGACGA GGGGCTGGCC
CCGCCCGAGC GCAAGGCCGC CGACCATGCC CGGCTGAACG CCCTGCTGGG CCTGGCCGAG
GCGACGGCCT GCCGCCGTGT CGCCCTGCTG CGCTATTTCG GCGAAGAGGC CGCGGCCTGC
GGCAATTGCG ACATCTGCGA CAACCCGCCC GAATGCTTCG ACGCGACCGA GGCGGCGCAA
AAGGTGCTGT CGGCCGTGCT GCGCACCGGC CAGACCTATG GCGCGGGTCA TGTCATCGAC
GTGCTGACCG GCACCATGAC CGACCGCATA CGCCAGCGCG GCCATGACCG GCTGCCGACC
TTTGGCGTCG GGCGCGACAT GGCCAAGCCG CAATGGCAGG CGGTCATCCG GCAGATGCTG
GGCCGCGACC TGATCCGCCC CGATCCCGAG CGTCACGGCG GCCTGGCCAT CACCGCCGCC
GCCCATCCGG TGCTGCGCGG CGAAGAGCGT ATCACCCTGC GTCGCGATGC CATGACACGC
GCACGCCCCG CCGTGGTGGT TCGCACGCAG GTCGATGAAG AGGACGCGCC GCTGCTTTCC
GCGCTCAAGG CCAAGCGCCG CGCGCTGGCC GAGGCGGCGC GGGTGCCGGC CTATGTCATC
TTTCCCGACC GCACGCTGAT CGAGATGGCC CAAAGCCGCC CCCGCACGCT GGACGAGATG
GCCCGGGTGA ACGGCGTCGG CGCCAAGAAG CTGGAAAGCT ATGGCGAGGA GTTCCTGCGC
GTCATCGCCG GCGAGGTGGC GCCGATGCAT CCCGCGCGCC GTGCGCTTGC CGGCCGCGCC
TCGGGCGATC TGTTCGACCG GCTGGCCGAG GCGCAGGCCC GGCTGATGCG AGGCGAGGAC
GGCACGGAAA AGCCACTATC CGTCAGTAAC TCCGCCCTGC GCCGCATTGC CGAGGACCGA
CCACGCGACC TGGCGCGCTA TCTGGACGCG GCGCGGCTGG ACCGTTTCGG CGCCGCCTTC
GCCGCCGAGA TCGCCGCCGA CCCCGAGGGC TGA
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| Protein sequence | MPALPVHGTA GREWNGHALR SLDADTRRRL VRDDRPYHHV MADQLPGAEP APAADLAGLE
RAQPPAGADL RPRPLDPAEH GRAGPGAAGR LYRHHHPATR ARQQRGLVLR LLGMSAAPLL
RQVFGFDAFR PGQEEIVDAV AAGRDVLAIM PTGGGKSLCY QLPALMRDGL TVVISPLIAL
MRDQVRALTE AGVAAAALTS GNSDEENSEV LRALNARELR LLYMAPERLA SGATIPMLRR
AGVQAIAVDE AHCVSQWGHD FRPDYLRVGE LRRTLSVPLA AFTATADAET REEIVKRLFD
GAQPQSFLRG FDRPNIHLAF QPKDGPRRQI LDFAAARRGQ SGIVYCGTRA KTETLAGALN
EAGLAAVAYH GGMEPDQRRK VEARFQREDG LIVVATVAFG MGIDKPDIRW VAHADLPKSI
EAYYQEIGRG GRDGAPAETL TLYGPDDIRL RRGQIDEGLA PPERKAADHA RLNALLGLAE
ATACRRVALL RYFGEEAAAC GNCDICDNPP ECFDATEAAQ KVLSAVLRTG QTYGAGHVID
VLTGTMTDRI RQRGHDRLPT FGVGRDMAKP QWQAVIRQML GRDLIRPDPE RHGGLAITAA
AHPVLRGEER ITLRRDAMTR ARPAVVVRTQ VDEEDAPLLS ALKAKRRALA EAARVPAYVI
FPDRTLIEMA QSRPRTLDEM ARVNGVGAKK LESYGEEFLR VIAGEVAPMH PARRALAGRA
SGDLFDRLAE AQARLMRGED GTEKPLSVSN SALRRIAEDR PRDLARYLDA ARLDRFGAAF
AAEIAADPEG
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