| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2644 |
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| Symbol | |
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| ID | 4581189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2654388 |
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| End bp | 2655395 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639769973 |
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| Product | phage integrase family protein |
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| Protein accession | YP_916427 |
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| Protein GI | 119385371 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00120469 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCG TTCCCTATCT CCGCTCGAAA CTGCGCCGGG GGCGCTGGTT CCACACCTAT
CGCCGGGGTG ACAAGGAAAT CTCGCTTGGG GTGCATGGCC TGCACCCCAC CGACCCCCGA
GTGTTCGCGG CCTACTGCGC CGAACATGCG CGGTGGGAGC ATCGCCCGCC AGAGACCGCC
ACGCCCAAGA GCGGAACGTT CGCTTGGGCG GTTGACCTTT ACACGTCCGG CAACTGGAAG
TGGCTGAACG AATACAGTGA AGGCACCCGG AAAGCCCGGC AAGCCATCCT CAAGCGTTAT
GTGCGCGCCC AAGGCAATCG CCCGCTCTCT GCCATCACTC CGCGCGATAT CGAGAACGCG
CTTTACGCCA AGGGCGGGCA TGGGGCTGTC AATGACTTCA AGGCGCTTAG GCCCGTGTTC
GAGCATGTGA AGCGCCTCGG CTTCATCACC CGCAACCCGA TGATCGGCAT TGAGCTTGAC
CGGCCCATGT CGAACGAACT GCCAACTGCG GACGCGGACG ATATCGCGGC GTTTATCAAG
CGATGGGAGG TAGGGACGGT TGAACGGCTG ATATTCGACC TCGGCCTATA TACCGGCGCG
GCGCGGGCCG ACTTGGCCGT GATCGGCCGG CACAACATCA AGGGCAACGT GCTGATCTTC
AACCGGGTGA AAACCGGCGT GCCCAGCTAT GTGCCGATCA CCCCGGAACT GCGGGCCGTC
ATCGCCCGGA CGCCGGACAT TTCGCCAACC TTCATCCTGT CGAAGTGGCG CAAGCCATAC
CAGCCGCAGA GCCTCGGGCA GCGTTTTGAG GAGGCAGCGG TGGCGGCGGG GATGAAAGCG
AGGCTGCACG GCCTGCGGAA AGCCTTCTGC GTCTACTGGG CCGAGAATGG CAAAACCGTC
CATCAGATTG CCGCGATGGC TGGGCATCTG ACGCTGAAAG AAGTGGAGCG ATACACCCGC
GCCGCTGACC GTGAACAGAT CGTCCGCCTG GTTATGGGGG AGGTGTGA
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| Protein sequence | MKTVPYLRSK LRRGRWFHTY RRGDKEISLG VHGLHPTDPR VFAAYCAEHA RWEHRPPETA
TPKSGTFAWA VDLYTSGNWK WLNEYSEGTR KARQAILKRY VRAQGNRPLS AITPRDIENA
LYAKGGHGAV NDFKALRPVF EHVKRLGFIT RNPMIGIELD RPMSNELPTA DADDIAAFIK
RWEVGTVERL IFDLGLYTGA ARADLAVIGR HNIKGNVLIF NRVKTGVPSY VPITPELRAV
IARTPDISPT FILSKWRKPY QPQSLGQRFE EAAVAAGMKA RLHGLRKAFC VYWAENGKTV
HQIAAMAGHL TLKEVERYTR AADREQIVRL VMGEV
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