Gene Pden_2569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2569 
Symbol 
ID4579874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2582429 
End bp2583205 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content71% 
IMG OID639769898 
ProductABC transporter related 
Protein accessionYP_916352 
Protein GI119385296 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00537218 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.36602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGGT TGCTGGCCCG CGGTATCTCG GTCCGCTACG GCACCCGCTC CGTGCTGGAG 
GGGCTGGACC TGCCGCTGCT GCGCCCGGGC GAGGTCACGG TGCTGGCCGG GCCGAACGCG
GCCGGGAAAT CGACGCTCCT GCGCGCAATC GCCCAGTTGC AGCCCCATGG CGGGCAGGTC
TTTCTGGATG GCCAGGAGCT GTCCCATACC CCGATGCGCG ACCGCGCCCG GCTGATCGGC
TTCATGCCGC AAAGCCTGCC GTCGAGCTCA TCGCTGGTGG CGCTGGAAAG CGTGATCGCG
GCACTGCGCG CGGGCGATAC GCTGGGCGCG CGGCAGGCCG ATGCCACCGC CATGGCTGTG
CTGGACAAGC TGGGTATCGG CGCGCTGGCG CTGGAGCCCC TTTCGGCGCT GTCGGGTGGA
CAGCGCCAGA TGGTCAGCCT GGCGCAGGCC ATCGTGCGCG ATCCGCGCCT GCTGCTTCTG
GACGAGCCGA CCAGCGCGCT GGACCTTGCG CGACAGGTGC GGCTCTTGTC GGAACTGCGC
CGGCTGGCGG GCGAGGGGCG CATCGTCGTC GCCGTGCTGC ACGACCTGGC GCTGGCGGCG
CAATGGGCCG ACCGCATCGT GCTGATCCAC GGCGGCCATA CCCATGCCGA GGGCGCCCCG
GAACAGGTGC TGACGCCGCA GCTTCTGGCC GAAGTCTATG GCGTCGAGGC GCGGGTCGAG
CGCTGCTCGC ACGGGCGGAT CATGGTGCTG ATCGACGGCG AACACGCCCC GGCCTGA
 
Protein sequence
MQGLLARGIS VRYGTRSVLE GLDLPLLRPG EVTVLAGPNA AGKSTLLRAI AQLQPHGGQV 
FLDGQELSHT PMRDRARLIG FMPQSLPSSS SLVALESVIA ALRAGDTLGA RQADATAMAV
LDKLGIGALA LEPLSALSGG QRQMVSLAQA IVRDPRLLLL DEPTSALDLA RQVRLLSELR
RLAGEGRIVV AVLHDLALAA QWADRIVLIH GGHTHAEGAP EQVLTPQLLA EVYGVEARVE
RCSHGRIMVL IDGEHAPA