Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2569 |
Symbol | |
ID | 4579874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2582429 |
End bp | 2583205 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639769898 |
Product | ABC transporter related |
Protein accession | YP_916352 |
Protein GI | 119385296 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00537218 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.36602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGGGGT TGCTGGCCCG CGGTATCTCG GTCCGCTACG GCACCCGCTC CGTGCTGGAG GGGCTGGACC TGCCGCTGCT GCGCCCGGGC GAGGTCACGG TGCTGGCCGG GCCGAACGCG GCCGGGAAAT CGACGCTCCT GCGCGCAATC GCCCAGTTGC AGCCCCATGG CGGGCAGGTC TTTCTGGATG GCCAGGAGCT GTCCCATACC CCGATGCGCG ACCGCGCCCG GCTGATCGGC TTCATGCCGC AAAGCCTGCC GTCGAGCTCA TCGCTGGTGG CGCTGGAAAG CGTGATCGCG GCACTGCGCG CGGGCGATAC GCTGGGCGCG CGGCAGGCCG ATGCCACCGC CATGGCTGTG CTGGACAAGC TGGGTATCGG CGCGCTGGCG CTGGAGCCCC TTTCGGCGCT GTCGGGTGGA CAGCGCCAGA TGGTCAGCCT GGCGCAGGCC ATCGTGCGCG ATCCGCGCCT GCTGCTTCTG GACGAGCCGA CCAGCGCGCT GGACCTTGCG CGACAGGTGC GGCTCTTGTC GGAACTGCGC CGGCTGGCGG GCGAGGGGCG CATCGTCGTC GCCGTGCTGC ACGACCTGGC GCTGGCGGCG CAATGGGCCG ACCGCATCGT GCTGATCCAC GGCGGCCATA CCCATGCCGA GGGCGCCCCG GAACAGGTGC TGACGCCGCA GCTTCTGGCC GAAGTCTATG GCGTCGAGGC GCGGGTCGAG CGCTGCTCGC ACGGGCGGAT CATGGTGCTG ATCGACGGCG AACACGCCCC GGCCTGA
|
Protein sequence | MQGLLARGIS VRYGTRSVLE GLDLPLLRPG EVTVLAGPNA AGKSTLLRAI AQLQPHGGQV FLDGQELSHT PMRDRARLIG FMPQSLPSSS SLVALESVIA ALRAGDTLGA RQADATAMAV LDKLGIGALA LEPLSALSGG QRQMVSLAQA IVRDPRLLLL DEPTSALDLA RQVRLLSELR RLAGEGRIVV AVLHDLALAA QWADRIVLIH GGHTHAEGAP EQVLTPQLLA EVYGVEARVE RCSHGRIMVL IDGEHAPA
|
| |