Gene Pden_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2563 
Symbol 
ID4579868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2573003 
End bp2573602 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content69% 
IMG OID639769892 
Productcytochrome B561 
Protein accessionYP_916346 
Protein GI119385290 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.280781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.537439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCA GATCCCTGCC CTTGCGCGAT ACCGAGCAGG CCTATGGCAA GGTGACCCGC 
CTGCTGCATT GGAGCATCGC GGCGCTGATG CTGTGGCAGT TCTTCGGCAT GGGGCTGCGG
CTGCTTCTGG GCCGCACGCC GCTGGTGTCC TTTTTCGTCG GCTGGCATCA GCCTGTGGGG
ACGGTGCTGT TCCTGCTGAT CGTGCTGCGG GTGGGCTGGG CCCTGGCGAA CCGCAGCCGC
CGGCCGGATC ACGGCCCCGG GTTCTGGGGA CTGGCGGCGC GGCTGGGCCA TCTGGCGCTG
TATCTGGTCA TGGTGCTGGT GCCGGTCGCG GCCCTGCTGC GCGCCTATGG CGGCGAGCGG
GTCTTTGCCC CCTTCGGCTT CGAGATCTTT CCGGCCCAGC AGCCTCCCAT CGGCTGGATG
GTCGGGCTGG GCGATGCGCT GCATGGCGAG ATGGGCTGGC TGCTCCTGAC GCTGATCCTG
GGCCATGTCG TCATGGTCGG CGTGCACGAG GGCATGTGGC GCGACGGCAC GCTGGCGCGC
ATGGCCGGGC GGCGGCGGGC GGGACTTCAG GCCACGATTT CGGGCAGATC GGCAAGGTAA
 
Protein sequence
MTPRSLPLRD TEQAYGKVTR LLHWSIAALM LWQFFGMGLR LLLGRTPLVS FFVGWHQPVG 
TVLFLLIVLR VGWALANRSR RPDHGPGFWG LAARLGHLAL YLVMVLVPVA ALLRAYGGER
VFAPFGFEIF PAQQPPIGWM VGLGDALHGE MGWLLLTLIL GHVVMVGVHE GMWRDGTLAR
MAGRRRAGLQ ATISGRSAR