Gene Pden_2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2554 
Symbol 
ID4579859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2565872 
End bp2567143 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content71% 
IMG OID639769883 
Productdihydroorotase, multifunctional complex type 
Protein accessionYP_916337 
Protein GI119385281 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.521985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGC ACTTCCAGAA CGCCCGCCTG ATCGACCCCG AGACGCAATC GGTCGAGGAC 
GCCACGCTGA CCGTCCGCGA CGGCCGGATC GAGACCGTTG GTGCCGACGC CCCGCAAGGC
GCCGAACTGA TCGATTGCGG CGGCAGATGC CTTGCCCCCG GCCTGATCGA CTGGGGCGTC
AAGATCGGCG AGCCGGGCGA GCGGCACAAG GAAAGCTTCC GCAGCGCCGG GCTGGCGGCT
GCGGCGGGCG GCGTGACCAC GGTGATCGCG CGGCCGGACA CGATGCCGCC GATCGATGCC
CCGGAATCGC TGGAATTCGC CACCCGCCGT GCGGCCGATG CGCCGGTGAA CATCCGCCAC
ATGGCGGCGC TGACCCGCGC CCGCCAGGGG CGCGAGATGG TCGAGATGGG CTTTCTGCAG
GATGCCGGCG CCGTGGCCTT CACCGACGGG GTGCGGGTGG TTTCCGACAC CCGGCTCCTG
TCGCGCTGCA TGACCTATGC CCGCGGCCTT GGCGCGCTGA TCGTCGGCCA TCCGCAGGAG
CCGGGCCTGT CGAAAGGTAC GGCGGCGACC GGCGGCAAGT TCGCCTCGCT CTACGGCCTG
CCCGCGGTTT CGCCCATGGC CGAGGTGATG GGGCTCGACC GCGACCTGGC GCTGGTGGCG
ATGACCGGCG CCCGCTACCA TGCCGACCAG ATCACCGTCA CGGCCAGCCT GCCGGCGCTG
CGCCGCGCGC GCGAGGCCGG GCTGGACGTG ACCGCCGGCA TCTCGATCCA TCACCTGACG
CTCAACGAAT ACGACGTGGG CGGCTATCGC ACCTTCTTCC GCTTCACCCC GCCCTTGCGC
TCCGAGGAGG ACCGGCTGGC CATGGTCGAG GCGGTGGCCG AGGGGCTGAT CGACGTGATC
GCCAGCTTCC ACACCCCGCA GGACGAGGAA AGCAAGCGCC TGCCCTTTGC CGAGGCGGCG
CCGGGCGCGG TGGGGCTGCA AACCCTGCTG CCGGCGGCGA TGCGGCTTTA CCATCAGGGC
GGGCTGAGCC TGCCGCAGCT TTGGCGGGCG ATGTCGCTCA ATCCGGCGCG GCGGCTGGGA
CTGCCGGGCG GGCGGCTCTC GGCGGGCGCC CCGGCCGATC TGGTGCTGTT CGATCCCGAC
GCGCCCTTCG TGCTGGACCG CTTCACGCTG TTGTCGAAGT CGAAGAACAC GCCCTTCGAC
GGTGCGCGGA TGGAAGGGCG GGTGCTGGGC ACCTGGGTCG CCGGCCGCCG CGTCTTCGGA
GAGGATGCAT GA
 
Protein sequence
MILHFQNARL IDPETQSVED ATLTVRDGRI ETVGADAPQG AELIDCGGRC LAPGLIDWGV 
KIGEPGERHK ESFRSAGLAA AAGGVTTVIA RPDTMPPIDA PESLEFATRR AADAPVNIRH
MAALTRARQG REMVEMGFLQ DAGAVAFTDG VRVVSDTRLL SRCMTYARGL GALIVGHPQE
PGLSKGTAAT GGKFASLYGL PAVSPMAEVM GLDRDLALVA MTGARYHADQ ITVTASLPAL
RRAREAGLDV TAGISIHHLT LNEYDVGGYR TFFRFTPPLR SEEDRLAMVE AVAEGLIDVI
ASFHTPQDEE SKRLPFAEAA PGAVGLQTLL PAAMRLYHQG GLSLPQLWRA MSLNPARRLG
LPGGRLSAGA PADLVLFDPD APFVLDRFTL LSKSKNTPFD GARMEGRVLG TWVAGRRVFG
EDA