| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2546 |
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| Symbol | |
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| ID | 4579851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2558375 |
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| End bp | 2560618 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639769875 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_916329 |
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| Protein GI | 119385273 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.101431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACG ATCCGAATGT TCCAGATCCG ACCCCGCCCG ATCCGAGCCA GGATCAGACC
ACGTCCGAGC CGCTGTCTCG CGCCATCGGC GAGCGGTATC TGACCTATGC GCTTTCCACC
ATCATGAACC GGGCGCTGCC GGATGCGCGC GACGGGCTGA AGCCGGTGCA TCGCCGTATC
CTGTTCGCCA TGCGCGAACT CAGGCTTTCG CCCACGGGGG CCTTCCGCAA ATCGGCCAAG
ATCAGCGGCG ACGTGATGGG CAACTATCAC CCGCATGGCG ATGCCGCGAT CTACGACGCC
ATGGCGCGTT TGGCCCAGCC CTTTGCCATG CGCTATCCGC TGGTGGACGG GCAGGGCAAT
TTCGGCAATA TCGACGGCGA CAACCCCGCC GCCAGCCGCT ATACCGAGGC CCGCCTGACC
GCGGCCGCCG AGGCGCTGAT GGAGGGGCTG GCCGAGAACG CGGTCGATTT CCGCCCGAAC
TACGACGGCA CGCTGGAAGA ACCCATCGTG CTGCCCGCCG CCTTTCCGAA CCTTTTGTGC
AACGGCGCCT CGGGCATCGC GGTCGGCATG GCGACCAACG TGCCGCCGCA CAACCTGCAC
GAGGTGATCG ACGCCTGCCT GCATCTGATC AAGGCGCCGG ATGCGCGCGA CGACACGCTG
GTCTCGATCG TGCCGGGGCC GGATTTCCCG ACCGGCGGCG TGCTGGTCGA ATCGCGCGAA
ACCATTGCCG AGGCTTACCG GACCGGCCGT GGCAGCCTGC GGCTGCGGGC GCGCTGGTCG
GTCGAGGATC TGGGCCGCGG CCAGTGGCAG ATCGTCGTCA CCGAGATCCC CTATCAGGTG
CAGAAATCCA AGCTGATCGA GCGGCTGGCC GAGGTCATCC AGTTGAAGAA GGTGCCGATC
CTGGCCGATG TGCGCGACGA ATCGGCCGAG GACATCCGCA TCGTGCTGGA GCCGCGCACC
CGCGCCGTCG ATGCCGAGCA GCTGATGGCG GCGCTGTTCC GGGTGAGCGA CCTGGAGGTG
CGCTTCGGGT TGAACATGAA CGTGCTGATC GACGGCCGCG TGCCCAAGGT CTGCTCGCTG
AAAGAGGTGC TGCGCGCCTT TCTGGACCAC CGGCGCGAGG TGCTGGTGCG GCGCTCGAAC
CACCGGCTCG ACAAGATCGC GGCCCGGCTG GAGGTGCTGG AGGGCTATAT GATCGCCTTC
CTGAACCTCG ACCGCGTCAT CGAGATCATC CGGCACGAGG ACGATCCGAA GGCGGTCATG
ATCGCCGAGT TCAAGCTGTC CGACGTGCAG GTCGAGGCGA TCCTGAACAT GCGCCTGCGT
GCGCTGCGCC GGCTTGAGGA AATCGAACTG CGCGCCGAAC ACGAGAACCT GACCCGCGAG
CGCGAGGGCC TGGCGGCCAT GCTGGCCGAC GAGGGCGCGC AATGGGCCAG GATCGCCGAG
GAACTGCGCG AGACCCGGGC GAAATTCGGC AAGTCCGCCT CCGGCGGCCA GCGCCGCACC
GAGATCGGCG AGGCCGGCGA GGTGGCCGAG ATCGACATGG ACGCCATGAT CGAGCGCGAG
CCGATTACCG TCATCCTGTC GAAGATGGGC TGGATCCGCG CCATGAAGGG CCACCAGCCG
CTGGATGCCG AGGTCAAGTT CAAGGATGGC GACGGTCCGT TCATGGCGCT GCATGCCGAG
ACCACCGACA AGCTGATGGT CTTTGCCGCC AACGGCCGCT TCTATACCCT GCCGGCGAAC
AACCTGCCCG GCGGGCGCGG CATGGGCGAG CCGTTGCGGC TGATGATCGA CCTGCCGAAC
GATGCCGCCG TGATCGACAT GTTCCCCTGG CGCGACGGCG AGCGATATCT GGTCGCCTCG
AAGGCCGGGG ACGGGTTCGT CGTTGCCGGG GCCGACATCC TGGCGCAGAC CCGCGCCGGC
AAGCAGGTGC TGAACGGCGA GGCGGCGCTG TGCCGCCGCG TGACCGGCGA TCATGTCGCG
GTGGTCGGCC AGAACCGCAA GCTGCTGGTC TTTCCGTTGT CAGAACTGCC GGAAATGGCG
CGCGGCAAGG GCGTGCGCTT GCAGAAATAC AAGGATGGCG GGCTGTCGGA TGCCGTCTGC
ATCACCCTGG CCGAAGGGCT GCGCTGGCAG GAAACCGGCG GCCGGACGCG CAGCGAGCCG
GACCTGACCG AATGGCTCGG CAAGCGGGCG GGCGCAGGCT ACATGGCGCC GCGCGGCTTC
CCGCGCGACA ACAGGTTCAA CTGA
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| Protein sequence | MSDDPNVPDP TPPDPSQDQT TSEPLSRAIG ERYLTYALST IMNRALPDAR DGLKPVHRRI
LFAMRELRLS PTGAFRKSAK ISGDVMGNYH PHGDAAIYDA MARLAQPFAM RYPLVDGQGN
FGNIDGDNPA ASRYTEARLT AAAEALMEGL AENAVDFRPN YDGTLEEPIV LPAAFPNLLC
NGASGIAVGM ATNVPPHNLH EVIDACLHLI KAPDARDDTL VSIVPGPDFP TGGVLVESRE
TIAEAYRTGR GSLRLRARWS VEDLGRGQWQ IVVTEIPYQV QKSKLIERLA EVIQLKKVPI
LADVRDESAE DIRIVLEPRT RAVDAEQLMA ALFRVSDLEV RFGLNMNVLI DGRVPKVCSL
KEVLRAFLDH RREVLVRRSN HRLDKIAARL EVLEGYMIAF LNLDRVIEII RHEDDPKAVM
IAEFKLSDVQ VEAILNMRLR ALRRLEEIEL RAEHENLTRE REGLAAMLAD EGAQWARIAE
ELRETRAKFG KSASGGQRRT EIGEAGEVAE IDMDAMIERE PITVILSKMG WIRAMKGHQP
LDAEVKFKDG DGPFMALHAE TTDKLMVFAA NGRFYTLPAN NLPGGRGMGE PLRLMIDLPN
DAAVIDMFPW RDGERYLVAS KAGDGFVVAG ADILAQTRAG KQVLNGEAAL CRRVTGDHVA
VVGQNRKLLV FPLSELPEMA RGKGVRLQKY KDGGLSDAVC ITLAEGLRWQ ETGGRTRSEP
DLTEWLGKRA GAGYMAPRGF PRDNRFN
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