Gene Pden_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2542 
Symbol 
ID4579847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2555634 
End bp2556383 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content70% 
IMG OID639769871 
Productprecorrin 6A synthase 
Protein accessionYP_916325 
Protein GI119385269 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2243] Precorrin-2 methylase 
TIGRFAM ID[TIGR02434] precorrin-6A synthase (deacetylating) 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.786467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGC TTGCGCTGAT CGGCATCGGC ACCGGCAGCC CCGGCCACCT TACGCGCGAG 
GGCATCGCCG CGATGGCGGA TGCCGACCTG ATCCTGATCC CTGCCAAGGG CGATGACAAG
GCCGACCTGG CCGATCTGCG CCGGGCGCTT TGCCAGCAGG TGCTGGCCAG CCCACCGCCG
CTGGCCGTCT TCGACATGCC CGCGCGCGAT GCGGCGGACG GCTATCGGCA GGGCGTCGAG
GCATGGCACG ACGCCATCGC CGAACGCTGG GAACAGGTGA TCCGCGCCCA TGGCGCCATC
CGCCCGGCAC TGCTGGTCTG GGGCGACCCG TCGCTTTACG ACAGCACGCT GCGCATCGCG
GAACGGGTGG CGCGCCGCCT GCCGCTGAAC CTGCGCGTGA TCCCCGGCAT CACCGCGATC
CAGGCACTTT GCGCCGCCCA TGCCATCCCG CTGAATGCGG TTGCCGCGCC GGTGCTGATC
ACCACCGGCC GCCGGATCCG CGACCACGGC TGGCCCGGAA CGGTGGACCG GCTGGTCGTG
ATGCTGGACG GCGAATGCTC GTTCCAAAGC CTGGATTCCG AGGGGCTGCA TATCTGGTGG
GGGGCCTTTC TGGGCATGCC GAACCAGATC CTGATCCGGG GGCCGCTGCC CGAGGTCGCA
GGGCATATCC TGGAGACCCG CGCCCGGGCG CGGGCCCAGC ACGGCTGGAT CATGGACATC
TACCTGCTCG AGCGATGCCG GTCACGCTGA
 
Protein sequence
MIELALIGIG TGSPGHLTRE GIAAMADADL ILIPAKGDDK ADLADLRRAL CQQVLASPPP 
LAVFDMPARD AADGYRQGVE AWHDAIAERW EQVIRAHGAI RPALLVWGDP SLYDSTLRIA
ERVARRLPLN LRVIPGITAI QALCAAHAIP LNAVAAPVLI TTGRRIRDHG WPGTVDRLVV
MLDGECSFQS LDSEGLHIWW GAFLGMPNQI LIRGPLPEVA GHILETRARA RAQHGWIMDI
YLLERCRSR