Gene Pden_2533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2533 
Symbol 
ID4579838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2548025 
End bp2549188 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content73% 
IMG OID639769862 
Productprecorrin-3B synthase 
Protein accessionYP_916316 
Protein GI119385260 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0155] Sulfite reductase, beta subunit (hemoprotein) 
TIGRFAM ID[TIGR02435] precorrin-3B synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.134816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACG AGGTCAAGGG CTGGTGTCCC GGCGCATTGC GACCGATGGC CTCGGGCGAC 
GGGCTGGTCC TGCGCATCCG GGCCCGGAAC GGCAGGCTGA TGCCCGATCA GGCGCAGGCC
ATAGCGGACC TCTCCTGGAG CCATGGCAAC GGGCTGATGG ACCTGACCAG CCGCGCCAAC
CTGCAGTTGC GCGGACTGAC CCCCGCCGGC CATGCGGCAA GCGTTGCGAT TCTGGCCAGG
CTCGGCCTGA TCGACCGCGA CGCCGGGGCC GAAGCGCGGC GCAACGTGAT CCTGTCGCCC
TTTGCCCCCG TGGGCAGCGC GGCCTGGCAA CTGGCCGAGG CCATGGCCCG GGCGATGACC
GAGCCGGAGG CGCCGCAGGT GCCCGGCAAG TTCGGTTTTG CCGTCGATAC CGACCCGCCG
GTGCTGGCGC AGACGCCCTC GGACATCAGG CTGCACCCGC AGGGCCCGGG ATGGCTGATC
GTGCCGGATG GCGGCGACTG GGCGCTGGCG GCCAAGGACA CGCACGAGGC CGCAGCCCGC
GCCGTCGATC TGGCACGCTG GTTCATGCAG GGCGGCGTGC GGGACGGGCG CGGGCGGATG
CGCGACTATC TGCGCCGCGC TCCCGCCCTG CCCCACGGCG CCCTGCCGCT GGCATCCTTT
CCGTTTTCCA AATACCCATG CGACGGCGCC ACCGAAGCCG CCTGTGCCGA TCCGCCCGGA
CCCGGCCCGG CGCCGAACGG CTGGCTGCTG GGCTTTGCCT TCGGCCAGAT CACCGCCGCC
CAATTGGCCA GGGCGGCCGC ACTTGGCCCG CTACGCCTGA CCCCATGGCG CGCGCTGCTG
ATCGAGGGTG CGGCCCGCCC CCGCATCGAC GGCGCCATTC TCAAGCCCGA CGACCCGCTC
TTGCGCATCC ATGCCTGCAC CGGCGCCCCC GGCTGCCCGC AGGCGCGGGC CGATGTCCGC
GCGCTGGCCC GCAGCCTGGC GCCGCGTCTC GCACCCGGCC AAAGCCTGCA TGTCAGCGGC
TGCGCCAAGG GCTGCGCATA TCGGGGCGCG GCCTCGGCGA CGCTGGTCGC CACCACGCCC
GGCCGCTTCG ACCTGATCCG AAACGGCGGC ACGCGCGATC CCGTCACGCT GGCGGGGCTT
GCGCCGGACC GCATTCCGCT CTGA
 
Protein sequence
MSYEVKGWCP GALRPMASGD GLVLRIRARN GRLMPDQAQA IADLSWSHGN GLMDLTSRAN 
LQLRGLTPAG HAASVAILAR LGLIDRDAGA EARRNVILSP FAPVGSAAWQ LAEAMARAMT
EPEAPQVPGK FGFAVDTDPP VLAQTPSDIR LHPQGPGWLI VPDGGDWALA AKDTHEAAAR
AVDLARWFMQ GGVRDGRGRM RDYLRRAPAL PHGALPLASF PFSKYPCDGA TEAACADPPG
PGPAPNGWLL GFAFGQITAA QLARAAALGP LRLTPWRALL IEGAARPRID GAILKPDDPL
LRIHACTGAP GCPQARADVR ALARSLAPRL APGQSLHVSG CAKGCAYRGA ASATLVATTP
GRFDLIRNGG TRDPVTLAGL APDRIPL