| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2508 |
|---|
| Symbol | |
|---|
| ID | 4580146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2527228 |
|---|
| End bp | 2528643 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639769837 |
|---|
| Product | carboxyl-terminal protease |
|---|
| Protein accession | YP_916291 |
|---|
| Protein GI | 119385235 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATT ATCTTCTGGC AGGGGCGATC GGCACGCTTG CGGGCATCAC CGTCGCCACC
CAATTCGCCG GCCCCTTGGT CGCGCAGGAA ACGGGCAAGA ACGCCTCGGT CTACGAACAG
CTGGACCTGT TCGGCAACGT GTTCGAGCGC GTGCGCGCCG ATTACGTCGA GCAGGTGGAC
GACAAGAAGC TGATCGAGGC GGCGATCAAC GGCATGCTGA CCTCGCTTGA CCCGCACAGC
TCGTTCCTGT CGGCCAAGGA TTACGACGAC ATGCAGACCC AGACCCGCGG CAGCTTCGGC
GGGCTGGGGA TCGAGGTCGG GCAAGAGGAC GGGCTGGTCA AGGTGATCTC GCCCATCGAC
GACACGCCCG CCGCCGAGGC CGGCGTGAAG GCCGGCGACT ACATCACCCA TGTGAACGGC
GAATCGCTGA TGGGCCTGAC GCTGGACGAA GCGGTCGAGA AGATGCGCGG CCCGGTCGGC
TCGGAAATCA AGATCACCAT CCTGCGCGAG GGCGAGAAGG AGCCCTTCGA CCTGACCATC
ACCCGCGACA CGATCAAGCT GACCGTGGTC AAGACCCGGA TCGAGGGTCA TGCCGTGGTG
CTGCGGATCT CCACCTTCAA CGACGAAACC ATGCAGACGC TGAATACCGA GATGGCCAAG
GCGATCAAGG ACGCGGGCGG CATCGACAAG GTGACGGGCT TCGTGGTGGA CCTGCGCAAC
AACCCGGGCG GGCTGTTGAA CCAGGCCATC GAGGTGTCGG ATGCCTTCCT CGACAAGGGC
GAGATCGTCT CGACCCGCGG CCGCAAGCCC GAGGAAAGCG AACGCTGGAA CGCCAAGACC
GGCGATCTGG CGCAGGGCAA GCCGATGGTG GTGCTGATCA ACGGCGGTTC TGCCTCGGCA
TCCGAGATCG TCACCGGCGC GTTGCAGGAC CACCGCCGCG CCATCGTCGT CGGCACCAAG
AGCTTCGGCA AGGGCTCGGT CCAGACGGTG ATGCCGGTCA CCTCCGACAG CGCCATCCGG
CTGACCACGG CGCGCTATTA CACGCCCTCG GGCCGCTCGA TCCAGTCTCT GGGCATCCAG
CCCGACATCA TCGTCGAGCA GCCCACGCCG AAACCGCAGG AAGAGGACGA GGCCGGCAAG
CCCCGGACCG AATCGAAATT CCTGAACTCC GAGGCCGATC TGCGCGGCGC GCTGAACAAC
GATTCGATCA GCGACGAAGA GCGCAAGCAG ATCGAGGAGG AGGCCAAGCA GGTCGAGGCC
ACCGCCAAGC TGCGCGAAGA GGATTATCAG CTGGCCTATG CCGTGGACAT CCTCAAGGGC
CTGGCGGCGG TGGATTACCA CGCCCAGGCG GTGCCGGAGG CCGCGAAACC CGCCAATACC
GGCGAGGACG CGGCCCAGGG GGCGCAGGCG GAATGA
|
|---|
| Protein sequence | MKHYLLAGAI GTLAGITVAT QFAGPLVAQE TGKNASVYEQ LDLFGNVFER VRADYVEQVD
DKKLIEAAIN GMLTSLDPHS SFLSAKDYDD MQTQTRGSFG GLGIEVGQED GLVKVISPID
DTPAAEAGVK AGDYITHVNG ESLMGLTLDE AVEKMRGPVG SEIKITILRE GEKEPFDLTI
TRDTIKLTVV KTRIEGHAVV LRISTFNDET MQTLNTEMAK AIKDAGGIDK VTGFVVDLRN
NPGGLLNQAI EVSDAFLDKG EIVSTRGRKP EESERWNAKT GDLAQGKPMV VLINGGSASA
SEIVTGALQD HRRAIVVGTK SFGKGSVQTV MPVTSDSAIR LTTARYYTPS GRSIQSLGIQ
PDIIVEQPTP KPQEEDEAGK PRTESKFLNS EADLRGALNN DSISDEERKQ IEEEAKQVEA
TAKLREEDYQ LAYAVDILKG LAAVDYHAQA VPEAAKPANT GEDAAQGAQA E
|
|---|
| |