Gene Pden_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2500 
Symbol 
ID4580138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2518704 
End bp2519414 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content70% 
IMG OID639769829 
Producthypothetical protein 
Protein accessionYP_916283 
Protein GI119385227 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.392304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.936606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG AGCCCGCGGC CGAACTGACC GAGGAGATCC GCGCCCGGCT GCTTGCCCGG 
CCCGAGCTCA TCCTCTCCGA CCGCGACCTG ATGCGCGCGC TGATCGGCGC GCGCGAGGCC
GAGGTGGGCG AGAACGTCAT CGACATCCGC GGCCGCGCCA TGCAGGCGCT GGAATCGCGG
CTCGACCGGC TGGAGGCCGC GCATGAATCG GTGATCTCGG CCGCCTATGA CAACCAGTCG
GGGATGAACA CCATCCACCG CGCCGTGCTG TCGCTGCTGG AACCGATGGA TTTCGAGGAG
TTCCTGGAAA ACCTCGACAT CGCGGTCGCG CCGATCCTGC GGGTGGAAAC CTTGCGGCTG
GTGATGGAAT CGGGCGGTGC GATACCCGAG CCGGAAGACG GCGGCCCGCT GGTGATCGCC
CCCGCCGGCA CGGTGGCCGG GCTGATCTCG GGCGGGCGGC GGATGCCGCG CGGCGACGAC
ATCGTGCTGC GCCGCGCCGT GCCCGAGACC CTGCCCTTTC ATGGCGAGGC CCGGGCCCCG
ATCCGCTCCG AGGCGCTCTT GCCCATCGAC CTCGGCCCCG GCCGCTTCCC GGCGCTGCTG
CTCATGGGTT CGGCCGATAT CGGGCGCTTC AACCCCGCCC AGGGCACGGA TCTCCTGCGC
TTCTTCGGCC AGGCGTTCCG GCTGGTGCTG ATTTCCTGGC TCAGGAAATG A
 
Protein sequence
MSQEPAAELT EEIRARLLAR PELILSDRDL MRALIGAREA EVGENVIDIR GRAMQALESR 
LDRLEAAHES VISAAYDNQS GMNTIHRAVL SLLEPMDFEE FLENLDIAVA PILRVETLRL
VMESGGAIPE PEDGGPLVIA PAGTVAGLIS GGRRMPRGDD IVLRRAVPET LPFHGEARAP
IRSEALLPID LGPGRFPALL LMGSADIGRF NPAQGTDLLR FFGQAFRLVL ISWLRK