| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2498 |
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| Symbol | |
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| ID | 4580136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2515560 |
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| End bp | 2517761 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639769827 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_916281 |
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| Protein GI | 119385225 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.430233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCGC CGCTTTTCTA TCCCCATGGC GCGCGCATCG CGGTGCTGAC GCAAGAGGTG
GTCGGGGTGC TCGACTATCT TGCGCCCGAG GGGGGCGTGC GGCTGGGCCA GCTTGTCGTC
GTGCCGCTGG GTCCGCGCCG GGTGATGGGC GCGGTCTGGG GGCCGGGGAT CGGCGATTTC
GATGCGGCGA GGCTGCGGCC GGTGGCGCGG CTGATCGACG CGCCGCCGCT GACGCCGGGG
ATGATCGAGT TCCTGATCCG CATGGGCGAA TACACGCTGA CGCCGCTGCC CTTGCTTTTG
CGCATGGCGA CGCGGGCACC GGACCTGGAC CAGCCGCCCT CGGCCCGGCG CATCATCCAT
CGCGCGGGGC CGCCGCCCGC GCGCATGACC GATGCCCGCG CCGCCGTGCT GCGGGTAATC
GAGGATCACG GCGGCGCCGG TTTCGCGCCG GGCGAGCTGG CGCAGCTGGC CGGGGTCAGC
GCATCGGTGG TGCAGGGGCT GGTCAAGGCC GGCACGCTGG CCGAGGTGCT GGCGCCGCGC
GATGTGCCCT ATCCGCGACT GGACCCCGGC CTGCCGGGCA AGCCGCTGGC CGAGGATCAG
GCCGAGGCGG CGGAGACCCT GCGCGATGCG CTGAAGAGCC ACGCCTATGG CACTACGTTG
CTGCGCGGCG TTACCGGCTC GGGCAAGACC GAGGTTTATC TTGAGGCCGT CGCGGAATGC
CTGCGCCAGG GTCGGCAGGC GCTGGTGCTG CTGCCCGAGA TCGCGCTGTC GGCCGAGTTC
CTCGACCGGG TCGAGGCGCG CTTCGGTGCC CGGCCCGGCG AATGGCATTC GGGCATCACC
CGCACGGAAC GCCGGCGGCT GTGGACCATG GCGGCGCAAA ACCATGTCGG GCTGGTGGTG
GGCGCGCGTT CGGCGCTGTT CCTGCCCTTT GCCGACCTGG GCCTGATCGT CGTCGATGAA
GAGCACGATT CCAGCTACAA GCAGGAGGAT GCGGTCTATT ACAGCGCCCG CGACATGGCG
GTGCTGCGCG CCAGCGTCGA AGCTGCGCAG GTGGTGCTGG CCTCGGCCAC GCCCTCGGTC
GAAAGCTGGG TGAATGCGGG ATCGGGGAAA TACCGCCGCC TCGACCTGAG GGCGCGCTAT
GGCACGGCCG ACCTGCCCGA GATGGGCACC ATCGACCTGC GCCAGCAGGA GATGGAGAGG
GGCCGCTGGA TCAGCCCCCG CCTTGCCGCC GAGATCCGCG CGCGCAAGGA ACGCGGGGAG
CAGTCGCTGT TGTTCCTGAA CCGGCGCGGC TATGCGCCGA TCACTGCCTG CCGGGCCTGC
GGCCAGCAGA TCGGCTGCGA CCATTGCGAC GCTCGCATGG TCGAGCATCG CTTCCAGAAC
CGCCTGGTCT GCCATCAATG CGGCGCGACC AAGCCGATCC CGAACGCCTG CCCAAGCTGC
GGGGTCGAGG GCAAGATGAC CGCCATCGGG CCGGGGGTGG AACGGCTGGC CGAGGAGGTG
GCCGAGCGGT TCCCCGAGGC GAAGGCGACG GTCCTGTCCT CGGACCTGTT CCATTCGGCC
CGCGCGCTGA AAGAGGCGAT CGCCGAGATC GGGGCGGGCA GCACCGACAT CATCATCGGC
ACGCAGATCG TCGCCAAGGG GCACAATTTC CCCCGCCTGA CGCTGGTGGG CGTGATCGAC
GCCGACCTTG GCCTGCAGGG CGCCGACCTG CGCGCGGCCG AGCGCAGCTT CCAGCTGATG
CGGCAGGTGG CGGGACGGGC CGGGCGCGAG GGCGGCGATG CGCGGGGGCT GGCGCTGCTC
CAGACCCATC AGCCCGACCA TCCGGTGATC CGCGCCATCC TGTCGGGCGA GGACGAGGCG
TTCTGGGATG CCGAGGCCGT GGCGCGCCAG GCGGCGGGCA TGCCGCCCTT TGGCCGGCTG
GCGGGGATCA TCCTGTCGCA TCCCGACCAG CCGGTGGTCG AGGATTACGC CCGCGAACTG
GCTCGCCGCG CCGAGCCCCT GCGCGCCATC GGTGCCGAGC TGTTCGGCCC GGCCCCCGCA
CCCATCGCCC GCATCCGCGC GCGCTATCGG GTGCGGATGC TGATCCGTGC GCCGCGCCAG
GCGCCGGTGC AGGGCGCGAT CGCCGAGTGG CTGGCGTCGG CACCCAAACC GCCCAGCAAC
CTGCGGCTGG CGGTGGATAT CGATCCGCAA AGCTTTCTCT GA
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| Protein sequence | MSPPLFYPHG ARIAVLTQEV VGVLDYLAPE GGVRLGQLVV VPLGPRRVMG AVWGPGIGDF
DAARLRPVAR LIDAPPLTPG MIEFLIRMGE YTLTPLPLLL RMATRAPDLD QPPSARRIIH
RAGPPPARMT DARAAVLRVI EDHGGAGFAP GELAQLAGVS ASVVQGLVKA GTLAEVLAPR
DVPYPRLDPG LPGKPLAEDQ AEAAETLRDA LKSHAYGTTL LRGVTGSGKT EVYLEAVAEC
LRQGRQALVL LPEIALSAEF LDRVEARFGA RPGEWHSGIT RTERRRLWTM AAQNHVGLVV
GARSALFLPF ADLGLIVVDE EHDSSYKQED AVYYSARDMA VLRASVEAAQ VVLASATPSV
ESWVNAGSGK YRRLDLRARY GTADLPEMGT IDLRQQEMER GRWISPRLAA EIRARKERGE
QSLLFLNRRG YAPITACRAC GQQIGCDHCD ARMVEHRFQN RLVCHQCGAT KPIPNACPSC
GVEGKMTAIG PGVERLAEEV AERFPEAKAT VLSSDLFHSA RALKEAIAEI GAGSTDIIIG
TQIVAKGHNF PRLTLVGVID ADLGLQGADL RAAERSFQLM RQVAGRAGRE GGDARGLALL
QTHQPDHPVI RAILSGEDEA FWDAEAVARQ AAGMPPFGRL AGIILSHPDQ PVVEDYAREL
ARRAEPLRAI GAELFGPAPA PIARIRARYR VRMLIRAPRQ APVQGAIAEW LASAPKPPSN
LRLAVDIDPQ SFL
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