| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2485 |
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| Symbol | |
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| ID | 4580123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2500915 |
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| End bp | 2501829 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639769814 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_916268 |
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| Protein GI | 119385212 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.664042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCC GCCGCTTCCT GCTGCTGACC GCCTGTGCCG CGCTGCCCGG CACGGCACGG
GCCGCGACCG AGGAATGGCA GGGCCGCGCC ATGGGGGCCG ATGTCACGTT GCGGCTGCAT
GGCGCGAGCC CGGTGCAGGC GCGCGGCTTC TTTGCCGAGG CGGCGCGGCT GCTGGCCCAT
GTCGAGAACC TGTTCTCGCT GCATCGCGAT TCGGACCTCG TGCGGCTGAA CCGCGACGGG
CGGCTGCGTT TTCCCGCCGC CGGCATGGTC GAGCTGCTGG CCCTGTCCGA CCGGCTGCAC
CGCGCCACCG GCGGCGCATT CGACCCGACC GTGCAGCCGC TGTGGCTGGC GCGGGCGCGG
GGCGAGGACG AGGCCACGGC CCGCGCCCTG GCAGGCTGGC AGGCGGTCGA CTGGTCGCAG
GCCGAGGTCC GGCTGACCCG TCCCGGCATG GCGCTGACCT TCAACGGCCT CGCGCAGGGC
TGGGCCGCCG ACCGGCTGGC CGAGGCGGCC GCGCGCCATG ACCTGGCCGA GCTTCTGATC
GACGCGGGCG AGATCCGGGC GCTGGGCGTG CGGGACTGGC GCGTGGGGCT GGCCGATGCC
GCGGGGCGCG AGCACCGCCG CATCCGGTTG CGCGACCGTG CGGTGGCGAC ATCTTCGCCC
GGCGGCACGC TGATCGGGCC GCATGGCCTG CCGCATATCG TCGCACCGGG TGGCGGGGTG
CCGCTTTGGG ACACGATCTC GGTCAGTGCG GACAGCGCGG CGCTGGCGGA CGGGCTTTCG
ACCGCGCTTT GCCTGATGCC GCCCAAGGCC GCCTGCGCCG CGATGGCACG TCTGCCGGGC
TGCCGTATCG AGCTGGCGAT CGCCGCGCAG GACGCGGAAT TTCCGGACAA AATGTCCAGC
TTTTGCTTCA CTTGA
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| Protein sequence | MNRRRFLLLT ACAALPGTAR AATEEWQGRA MGADVTLRLH GASPVQARGF FAEAARLLAH
VENLFSLHRD SDLVRLNRDG RLRFPAAGMV ELLALSDRLH RATGGAFDPT VQPLWLARAR
GEDEATARAL AGWQAVDWSQ AEVRLTRPGM ALTFNGLAQG WAADRLAEAA ARHDLAELLI
DAGEIRALGV RDWRVGLADA AGREHRRIRL RDRAVATSSP GGTLIGPHGL PHIVAPGGGV
PLWDTISVSA DSAALADGLS TALCLMPPKA ACAAMARLPG CRIELAIAAQ DAEFPDKMSS
FCFT
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