| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2462 |
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| Symbol | |
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| ID | 4580795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2477635 |
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| End bp | 2479584 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639769791 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_916245 |
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| Protein GI | 119385189 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily
[COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.10862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.986613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCCT GGTGCGCGCG GTCGGGCTTT AGGCCCGCCG CCATCCTGGC CGCCCTGATC
GCGGCGCTGC TGCTGGCCGC ACAGGCGGCA GCGGCACCCA AGGTGGCGCT GGTCATCGGC
AACGCCGCCT ATGACGGCGT GCCGGCGCTG GACAATCCCG CCAACGATGC CGAGGATATG
ACCGCCGCCC TGCGTGACCT CGGCTTCCAG GTGATCCTGG GCGTGGACAG CGACCAGGCG
CAGATGCGGG CGCTGATCGG CCAGTTCGGC GCGGCGGCGC GGACCGCCGA GGTGGCGCTG
TTCTATTATG CCGGCCATGC CTTTCAGGTC GCGGACCAAA ACTATCTGCT GCCGCGGGAT
TTTCGGCTGG AGCGGCTCGA CCAGGCCACC GCCCGCACCG TTGCGCTGGA CGAGGCGATG
GCGGCGATGG CGGCGGTGCC GGGGATCAAG ATCGTGCTGC TGGACGCCTG CGGCGACAAT
CCGCTGCGGC TTCCCGACGG CGGCAGCGGA TTGGCCCGCA TCGGCAGCGC CGCCGATTTC
CTGATCGCCT ATGCCACCCA GCCCGGTGCC GTGGCCTTCG ACGGCGCCGG CCGCAACGGC
ACCTTCACCG AGGCGCTGCT GAGCCATATC CACACCCCCG CGCAGGACAT CGGCGAGATG
ATGATCGCGG TGCGCAAGGA TGTGATGGCG CGCACGGGCG GGCAGCAGAT TCCCTGGGAC
GCCTCGGCGC TGACCCGGCA GTTCCGCTTT GCCGACGGAC CGCCCACGGC CTCGCCCGAG
ACGCTGTTCT ACCAGGTCGC CGTCCGCGCC GCCGACCCGG CGCTGCTGCG CCTTTACCTT
CAGCGCTATC CCAACGGCAG TCATGTCGGC GAGGTGCTGG CGCTGCTGGC GCAGGACCCC
GCCCGCTCAG GCCAGGCGCG GCGCAGCCTG GGACCCGAGG CCGAGGGCGC GGCGGGCGAG
CAGCTTTGGG ATCTGGCGCG GCGCAGCCGG CTGAAGCCGC TGCTGGAAAG CTATGCCCGC
AGCTATCCCA ACGGGCCGCA TATCGACGAG GCGCGGCGCA TGCTGGCCGA ACTGTCCGCC
GAAACCGACC CCGGCCCGGC CCGGCGCTGC GAATTGCTGG CCACCCATCC GCGCGACGGG
ACCGAGACCA CGCCCGGCAT CTCCTACGAG CTTCTGGCGC AGAACGCCGT CGAGGCGATG
CGGTCCTGCG AAGAGGCCAG CCGCCTCGAC CCCCGGCAGG CGAAATACGT CGCGCTGCTG
GCGCGGGCCA CCGCGGCGGC CGGCCTGCGG GCCGAGGCGG TCGCGCTTTA CGAAAACGCG
GCCGGGCGCG GCGACCTGCG GGCCATGGTC AGCCTGGCGC TGCTGAAGGA AACCGGCGAC
GGCGTAGCGC CCGACCCTGC CGGGGCCCTG GCGCTTTACG AAAGGGCCGC CGCCGCCGGC
AGCGCCGACG CGGCGATCAA TCTGGCGGTG ACGCTTCTGG ACAGCCGGCG CCCCCAGGAC
CGGCAGCGGG GCATCGCGCT GATGCAGCAG GCTTCGCAGG CCGGATCGCC CATCGCCACC
TTCAACCTGG GCGTTCTGGC GCAAGAGGGC CGCTTCGGCG ATCCCGGCGA CGCCCGGACA
CTGTTCGAAC GCGCCGCGCG CGAGGGCGAG CCGCGCGGCC ATCGCGCAGC AGCCGTGCTG
CTGGACGAGG GGCGCGGCCT GCCCCGCGAC CCCTCGCGCG CGGCGGTGCA ACTGCTGCTG
GGGGTCGCCT CGGACGATGG CAGCCTGCTG CGCGAGCTGG CCGAGCGGGA CGGGAACTGG
AACCCCGAGA CGCTGAGCGC GCTGCAACGC CGCTTGGCGC GGGCGGGGCT TTATCAGGGC
GAGGCAGACG GCGAACCCGG CCCGGCACTG GATCAGGCGT TGGAGCTGTG GCGCAACGGC
GGCTTCGACA CCGCCGCACT GTCAGGCTGA
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| Protein sequence | MPSWCARSGF RPAAILAALI AALLLAAQAA AAPKVALVIG NAAYDGVPAL DNPANDAEDM
TAALRDLGFQ VILGVDSDQA QMRALIGQFG AAARTAEVAL FYYAGHAFQV ADQNYLLPRD
FRLERLDQAT ARTVALDEAM AAMAAVPGIK IVLLDACGDN PLRLPDGGSG LARIGSAADF
LIAYATQPGA VAFDGAGRNG TFTEALLSHI HTPAQDIGEM MIAVRKDVMA RTGGQQIPWD
ASALTRQFRF ADGPPTASPE TLFYQVAVRA ADPALLRLYL QRYPNGSHVG EVLALLAQDP
ARSGQARRSL GPEAEGAAGE QLWDLARRSR LKPLLESYAR SYPNGPHIDE ARRMLAELSA
ETDPGPARRC ELLATHPRDG TETTPGISYE LLAQNAVEAM RSCEEASRLD PRQAKYVALL
ARATAAAGLR AEAVALYENA AGRGDLRAMV SLALLKETGD GVAPDPAGAL ALYERAAAAG
SADAAINLAV TLLDSRRPQD RQRGIALMQQ ASQAGSPIAT FNLGVLAQEG RFGDPGDART
LFERAAREGE PRGHRAAAVL LDEGRGLPRD PSRAAVQLLL GVASDDGSLL RELAERDGNW
NPETLSALQR RLARAGLYQG EADGEPGPAL DQALELWRNG GFDTAALSG
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