| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2411 |
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| Symbol | |
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| ID | 4580745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2408431 |
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| End bp | 2409807 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639769740 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_916195 |
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| Protein GI | 119385139 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.562073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.134585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGGAT TCAAGAAATC TTCTGTGCGG AAGAGGGCTT TCGTGCCGAC GCGTCGCGCA
ATATGCAGGC AGGCGGCGGT CCTGCCTCTC GTGCTTGCTC TGGCCGGCTG TGCGAGCGGT
CCCCCAAGCG AAACCGTTCG CAAGATCGGC GAGCGCGGCG AGAGCCTGCA GCCCCTGGCG
CCGGGTGACG GCAAGGGCGC CCGCGGCGCG GTGCGTTCCG CCCTGCTTCT CGACCCCGAG
GTGCGCGAGC AAGCCAGCCT CACCGGCGCC AATGTCGACC AGATCGCGGT CGAACGGGCG
GCCCTGCTGC CGAGCCTGAG CTTCGGCCTG GTCGGCGGCG TGGGGACGGC CGGGGCGGGC
GATCCCGATC TGGAACTGTC GGGCAAGCAG CTGCTGGTCG ATTTCGGCGG GACGAAACGC
GCGGTCGAGG CGGCCGACGT CAACCTTCAG ATCCAGTATC TGAAATTCCA GCGCGCGGTG
GACGAGTCCA TTGCCACCGG CTTGGTGACC TATCGCCAGG TGGCGATGCT GGAAGAGATG
GTTTCGGTCA AGGCGGCGCA ATTGGCGGCG ATGCAGGACC TGCACAAGCT GATTGCCGAG
CGGATCGACA TCGGGGCGTC CTCGGCGCCT GACCTTCTGG AGACGCGCAA TCGCCTCGAG
CGGGCGGAAT TCGAACTGCT CGACGCAAAG CTCGAACTGT CCGAGACGCG CGACAAGCTG
CTGCGGCTGT CGGGCCAAAG CCGGGGCGGC ACGATACCGG ACTTCCCGCA GAACTGCACG
CCGCCGGGCG GCGAGACCGA CGGGTTGCGG ATCGCGCGGC TTGAGCTCGT CAAGGCTCGG
CTGAATCTGG AGGAGGCGGA ACGGGCGAGG TTCCCCCGCA TCAGCCTCAA TCCGCTGGGG
CGGGCTGCCG TCGGCGGTGG CGGGATTTCC ACCGGGCTGA ATGTCGGCGT GGAATCGCCG
CTGTTCGAGG GCGGGGCGAT CAAGGCCCGC GAGAATGCGG CGCGCAACCG CCGGCAAAGC
GCCGAGGCGC TGGTCGAAAC CGAAGAGCGC AACATCCGGC TGGATGACCT GCGGCTGCGG
CGGCAGATCT CGTCGCTGAA GGAAAAGCGG GCCATGCTGG CTCGCCAGAT CGAGATCCTG
ACGGAAACCC GGGACCTTTA TCGCAGCCAG TATATCGACC TGGGCATCCG CCCGATCACC
GATCTTCTGG ATATGGAGGA ATCCCTGTTC GGGCGTCAGG TCGAGCTGGT CGAGGCGAAA
TTCGACCTGC AGGAGCGCCT GGTCGAATGC GCCGCGCGCA GCAAGGCGCT GCGCCGCGAT
CTCGGGCTCA CCCAATTCCA GCTCTACGGC TACCCGCTTA CCACGGATGG ATTCTGA
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| Protein sequence | MTGFKKSSVR KRAFVPTRRA ICRQAAVLPL VLALAGCASG PPSETVRKIG ERGESLQPLA
PGDGKGARGA VRSALLLDPE VREQASLTGA NVDQIAVERA ALLPSLSFGL VGGVGTAGAG
DPDLELSGKQ LLVDFGGTKR AVEAADVNLQ IQYLKFQRAV DESIATGLVT YRQVAMLEEM
VSVKAAQLAA MQDLHKLIAE RIDIGASSAP DLLETRNRLE RAEFELLDAK LELSETRDKL
LRLSGQSRGG TIPDFPQNCT PPGGETDGLR IARLELVKAR LNLEEAERAR FPRISLNPLG
RAAVGGGGIS TGLNVGVESP LFEGGAIKAR ENAARNRRQS AEALVETEER NIRLDDLRLR
RQISSLKEKR AMLARQIEIL TETRDLYRSQ YIDLGIRPIT DLLDMEESLF GRQVELVEAK
FDLQERLVEC AARSKALRRD LGLTQFQLYG YPLTTDGF
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