Gene Pden_2343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2343 
Symbol 
ID4579396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2338840 
End bp2339280 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content71% 
IMG OID639769673 
ProductMerR family transcriptional regulator 
Protein accessionYP_916130 
Protein GI119385074 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.264422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCCGA TCGGCAGGCT GGCCAAGGCC ACCGGCGTCA AGGTCCCGAC CATCCGCTAT 
TACGAGCAGA TCGGCCTTTT GCCCGAGCCC GAGCGGACGG CGGGCAACCA GCGGCTTTAC
ACGCAAGGCA CGCTGGAGCG GCTGGCCTTC ATCCGCCATG CCCGCGACCT GGGCTTTCCG
CTGGAGGCGA TCCGCGAGCT GCTCAGCCTG TCGGACCGTC CGGGCCAGTC CTGCGCCGCC
GCCGACGAAA TCGCCCGGCG CCAGCTTGCG GTGGTCGAGG CCAGGATGGC CCGGCTGGCG
GCGCTGCGCG ACGCATTGCA GCGCATGCTG GACCATTGCG CCAGCGGCAC CATCGCCGAT
TGCCGGGTCA TCGAGGTGCT GGGCGACCAC GGGCTTTGCG CCCATGACCA TGGCGCGGCC
GAGGCGGGCC ATCCGGCCTA G
 
Protein sequence
MFPIGRLAKA TGVKVPTIRY YEQIGLLPEP ERTAGNQRLY TQGTLERLAF IRHARDLGFP 
LEAIRELLSL SDRPGQSCAA ADEIARRQLA VVEARMARLA ALRDALQRML DHCASGTIAD
CRVIEVLGDH GLCAHDHGAA EAGHPA