| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2331 |
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| Symbol | valS |
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| ID | 4579384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2327364 |
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| End bp | 2330456 |
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| Gene Length | 3093 bp |
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| Protein Length | 1030 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639769661 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_916118 |
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| Protein GI | 119385062 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.748917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.908682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGG AAAAGAACTT CGACGCGCAG GCCGCCGAGG CGCGGATCGC GCGGGAATGG
GCGGCACGGA ATGCCTTCGC CGCGGGCGCC AATGCGAAAC CGGGGGCGGA AAGCTTCTCG
GTGGTGATCC CGCCCCCGAA CGTGACCGGC AGCCTGCATA TCGGCCACGC GCTGAACAAC
ACGCTGCAGG ACATCCTGGT GCGCTGGCAC CGGATGCGCG GCTTCGATAC GCTGTGGCAG
CCGGGCCAGG ACCATGCCGG CATCGCCACC CAGATGGTGG TCGAGCGCCG GATGGCCGAG
CGGCAGGAGC CGGGCCGCCG CGACATCGGC CGCGAGGCTT TCCTGCAAAA GGTCTGGGCC
TGGAAGCAGG AATCCGGCGA TACCATCATC GAGCAGCTGA AGCGCCTGGG CGCCTCTTGC
GACTGGTCGC GCAACGCCTT CACCATGTCA GGCGCTCCGG GCGCTCCAGC GGGCGAGGAA
GGCAATTTCC ACGATGCCGT CATCAAGGTC TTCGTGGACA TGTATGACAA GGGCCTGATC
TATCGCGGCA AGCGGCTGGT CAACTGGGAC CCGCATTTCG AGACGGCGAT CAGCGACCTC
GAAGTCGAGA ACCGCGAGGT TCCCGGCCAT ATGTGGCATT TCAAGTATCC GCTGGCCGGC
GGCGAGACCT ATGAATATGT CGAGCGCGAC GCGGACGGCA ACGTCACCCT GCGCGAGATG
CGCGACTATA TCTCGATCGC CACCACCCGC CCCGAAACCA TGCTGGGCGA CGGCGCGGTC
GCGGTCCACC CGGACGACGC CCGCTATGCC CCCATCGTCG GCAAGCTTTG CGAGATCCCG
GTCGGGCCCA AGGAACACCG CCGCCTGATC CCGATCATCA CCGACGAATA TCCCGACCCG
GATTTCGGCT CGGGCGCGGT CAAGATCACC GGCGCGCATG ACTTCAACGA CTATGCCGTC
GCCATGCGCA ACGAGATCCC GCTTTACGTG CTGATGGACG GCAAGGGGCG GATGCGCGCC
GACGGGCTTT CCTATGAGGA AAGCGCCGAG ATCGCCACCC GCGCGGCGCG GGGCGAGGAT
GTGGGCGACG TCTCGAACGT GAACCTGGTC CCCGAGGAAC TGCGCGGCCT GGACCGCTAC
GAGGCGCGGG CGCGGGTGAT CGAGGCGATC ACCGAGGAAG GGCTGGCCGT CACCTATCTG
CACAAGTCCA TCGACAAGGA AACTGGCGCC GAGCACCTGG AGCGCCGCCC GCTGGTCGAT
GCCAAGCCGA TCATGCAGCC CTTCGGCGAC CGTTCCGGCG TGGTCATCGA GCCGATGCTG
ACCGACCAGT GGTTCGTGGA CACCGCCCGC ATCGTCGGTC CGGCGCTGGA GGCGGTGCGC
AGCGGCGCGA CGAAGATCCT GCCCGAGCAG CATGAGAAGG TCTATTTCCA CTGGCTGGAG
AACATCGAGC CCTGGACCAT CAGCCGCCAG TTGTGGTGGG GCCACCAGAT CCCGGTCTGG
TATGGGCTCG ACCTGCGGCT GGAAGGCCAG GTCGAGGACG ACCACGACGG CGTTCTGGAC
GAGGTCGAGA TCTTTGCCCT GCTGGAAGAG GGCCTGGTCC ATCGCGACGA GATCCACCAC
GCGGCGGCCA GTTTCGCCGA GGTGGCCGAG CGGTTCCGCG ATTCCATCGC CCAACTGCCA
GTGCCACTGG AAATGGCCCG CGTGATCGAG GTCGCGGATC GCGAGGCCGC CATCGACGCC
TTTGCCCAGG GGCTGGCCGA TTACAACCTG ACGCAGGATC CGACCAGGCT GGTCTATCCG
GTCTGGCGCG ACGCGGATGT GCTGGACACC TGGTTTTCCT CGGGCCTCTG GCCCATCGGG
ACGCTGGGCT GGCCCGAGGA CACGACCGAG TTGCGCAAGT ATTTCCCGAC CTCGGTGCTG
GTGACGGGCT TCGACATCAT CTTCTTCTGG GTGGCCCGAA TGATGATGAT GCAACTGGCC
GTGGTCGGGC AGGTGCCCTT CCGCACCGTC TATGTCCACG GGCTGGTGCG CGACGAAAAG
GGCGCCAAGA TGTCGAAGTC GAAAGGCAAC GTCATCGACC CGCTGACCCT GATCGACGAA
TATGGCGCCG ACGCGCTGCG CTTTACCCTG ACCAGCATGG CCGCGATGGG CCGCGATCCC
AAGCTGGGGC CGAAGCATGT CGAGGCGAAC CGCAATTTCG TCACCAAGAT CTGGAACGCC
ACCCGCTTTG CCGAGATGAA CGGCGTTCGC GGCGGGGGCG CGCGACCCGA GCCGCAGCAT
GTGGTGAACC GCTGGATCAT CGGCGAGCTT GCCCGCATCC GGCAGGCGAC CGACGAGGCG
CTGGAAACAT TCCGCTTCAA CGATGCGGCG ACGGGGCTTT ACGCCTTTGT CTGGGGCAAG
GTCTGCGACT GGTATGTCGA GTTCTCGAAG CCGCTCTTCG ACGGCGAGTA TCGCGAGGAA
ACCCAGGCCA CCATGGGCTG GGTGCTGGAC CAGTGCTATA CCTTGCTGCA CCCGATCATG
CCCTTCGTCA CCGAAGAACT TTGGGCGCTG ACCGGGGATC GCGAGCGGAT GCTGGTGCAT
GGCGACTGGC CCGCCTATGG CGCCGAGTTG ATCGACGCGG ATGCCGACCG GCAGATGAAC
TGGGTGATTG CGCTCATCGA GAACATCCGC TCGGCCCGCG CCCAGATCGG CGTGCCGGCC
GGCGCCCGCC CCGACCTGCT CGTGACCCAG GCGGATGCCG CCGCCCGGGC GGCCCTTGCC
GCCAACGGCC CGCTGATCGA GCGCCTGGCG CGCGTGAACC CGCCGCAGGA CGGCGCGATG
GGGCCAGGCA TGATCTCGGT CGCCGCACTG GGGGCAAGCT TTGCCCTGCC GGTCGGCGAG
ATGATCGACG TGGGTGCCGA AACCGCGCGG CTGGAGAAGG CGGCAGGCAA GACCGAAAAG
GACGCCTCGG GCCTGCGCGG GCGGCTGGCC AACCCCCGAT TCGTCGAGAA TGCCGAACCC
GAGGTCATCG AGGAGACCCG CGAGAAGCTT GCCGCGCTGG AGGACGACCT GGCCCGCATC
CGGGCGGCGT TGGCGCAGTT GGCGGCGATG TGA
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| Protein sequence | MAMEKNFDAQ AAEARIAREW AARNAFAAGA NAKPGAESFS VVIPPPNVTG SLHIGHALNN
TLQDILVRWH RMRGFDTLWQ PGQDHAGIAT QMVVERRMAE RQEPGRRDIG REAFLQKVWA
WKQESGDTII EQLKRLGASC DWSRNAFTMS GAPGAPAGEE GNFHDAVIKV FVDMYDKGLI
YRGKRLVNWD PHFETAISDL EVENREVPGH MWHFKYPLAG GETYEYVERD ADGNVTLREM
RDYISIATTR PETMLGDGAV AVHPDDARYA PIVGKLCEIP VGPKEHRRLI PIITDEYPDP
DFGSGAVKIT GAHDFNDYAV AMRNEIPLYV LMDGKGRMRA DGLSYEESAE IATRAARGED
VGDVSNVNLV PEELRGLDRY EARARVIEAI TEEGLAVTYL HKSIDKETGA EHLERRPLVD
AKPIMQPFGD RSGVVIEPML TDQWFVDTAR IVGPALEAVR SGATKILPEQ HEKVYFHWLE
NIEPWTISRQ LWWGHQIPVW YGLDLRLEGQ VEDDHDGVLD EVEIFALLEE GLVHRDEIHH
AAASFAEVAE RFRDSIAQLP VPLEMARVIE VADREAAIDA FAQGLADYNL TQDPTRLVYP
VWRDADVLDT WFSSGLWPIG TLGWPEDTTE LRKYFPTSVL VTGFDIIFFW VARMMMMQLA
VVGQVPFRTV YVHGLVRDEK GAKMSKSKGN VIDPLTLIDE YGADALRFTL TSMAAMGRDP
KLGPKHVEAN RNFVTKIWNA TRFAEMNGVR GGGARPEPQH VVNRWIIGEL ARIRQATDEA
LETFRFNDAA TGLYAFVWGK VCDWYVEFSK PLFDGEYREE TQATMGWVLD QCYTLLHPIM
PFVTEELWAL TGDRERMLVH GDWPAYGAEL IDADADRQMN WVIALIENIR SARAQIGVPA
GARPDLLVTQ ADAAARAALA ANGPLIERLA RVNPPQDGAM GPGMISVAAL GASFALPVGE
MIDVGAETAR LEKAAGKTEK DASGLRGRLA NPRFVENAEP EVIEETREKL AALEDDLARI
RAALAQLAAM
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