Gene Pden_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2304 
SymbolradC 
ID4579357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2302913 
End bp2303704 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content67% 
IMG OID639769634 
ProductDNA repair protein RadC 
Protein accessionYP_916091 
Protein GI119385035 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.138327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0504467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGA ATCGCGCCTT TCACGAAGCA CCATTGCCGC TTTTCGCCCC CGCGCCAGGC 
TCTGCGGGGG ATGAAGCTCC GCTCGCCGGG GCCGCCTCCG TTGCGTGCGG CACACGCCCG
CCCAGCTATA TCGCCGATCA CCGTGCCCGG CTGCGGGAAC GCTTCATGCA GGGCGGCGCG
GCGGCCATGC CCGATTACGA ACTTCTGGAG CTGGTGCTGT TCCGCGCCAT CCCGCGCCAG
GACGTGAAGC CCCTGGCACG CCGGCTGCTC GATCGTTTCG GGGATTTCAA CCGCGTGCTT
TCCGCCCCGC CCGCCCGGCT GGCCGAGGTT TCGGGCCTCG GCCCCGCCGT CCTGCAAGAG
CTGAAGATCG TCGAGGCGGC GGCACAACGG CTCGCCCGGT CGCGCGTCAT GCATCGCCCG
GTGCTGACCA GTTGGGACGC GCTGCTGGAC TATTGCCACA CCGCCATGGC GCATGGCGAG
ATCGAACAGT TCCGGGTGCT CTATCTCGAC CGCAAGAATG TGCTGATCGC GGATGAGGAA
CAGGCGCGCG GCACCGTCGA TCACGTCCCG GTCTATCCGC GCGAGATCAT GCGCCGGGCG
CTGGAACTGT CCGCCAGCGC GCTGATTCTG GTGCACAACC ATCCTTCGGG CGACCCGACC
CCATCGCAGG CCGACATCGG CATGACGAAC CGCATCGTCG CGGCGGCCGA GGTGATGGGA
ATCGCGGTCC ACGACCACCT GATCATCGGC AGGTCGCGCG AACTCAGCTT TCGCAGCGAA
GGACTGCTTT AG
 
Protein sequence
MEPNRAFHEA PLPLFAPAPG SAGDEAPLAG AASVACGTRP PSYIADHRAR LRERFMQGGA 
AAMPDYELLE LVLFRAIPRQ DVKPLARRLL DRFGDFNRVL SAPPARLAEV SGLGPAVLQE
LKIVEAAAQR LARSRVMHRP VLTSWDALLD YCHTAMAHGE IEQFRVLYLD RKNVLIADEE
QARGTVDHVP VYPREIMRRA LELSASALIL VHNHPSGDPT PSQADIGMTN RIVAAAEVMG
IAVHDHLIIG RSRELSFRSE GLL