Gene Pden_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2298 
Symbol 
ID4579351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2295684 
End bp2296892 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content73% 
IMG OID639769628 
Productglycosyl transferase family protein 
Protein accessionYP_916085 
Protein GI119385029 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.200708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.319601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCGA GCGGGATGCC TTCGACCAGC ATCGTCGTCA TCTCGCGCCA TCGGCCGCAG 
GCTCTGGCCC GTTGCCTGAC CGCGCTGGCC GCCCAGACCC ATCCCGATTT CGAGATCGTG
CTGGTGGCCG ATCCCGCCTC GGCCGGCATC CGCCCGGACC TGCCGCTGAA GCGGCTGGCC
TTCGACCGCG CCAATGTCTC GGCGGCGCGC AACGAGGGGC TGGCGCTGGC GGCGGGCGAG
GTGGTGCTGT TCATCGACGA CGATGCGCTG GCCGCGCCGG GCTGGGCTGC GGCGCTGGCC
GCGCCCCTGG CCGATCCGCG CGTCCTTGCC GCAGCCGGCT TCACCCGCGG CCCGGACGGG
CTGCGCTGGC AGGTCCGGGC CGAGCGGATC ACGCGCTCGG GCCGGACCTT GCCGCTGAAT
ATTGCCGAAA CCACGCTGCT GGCACCCGAA AAGGGCAATC CGGTCAGCAC CATCGGCACG
AATTGCGGCT TTCGTCGCGA GGCGCTGCTG GCCATCGGCG GCTTCGATCC GGCGTTTGCC
TATTATCTGG ACGAAAGCGA CGTGAACCTG CGCATGGCGG CGCGCTTTCC GCAGGGGCTG
ACGGCAGTGG TGCCGGAGGC CGAGGTGATC CATGGCGCGG CCCCCGGCGC CGGCCGGGGC
GAGGCGGGCG TGCCCGGCGA TCTGACCGTC ATCGGCCGGT CGGCCGCGAT CTTTGCCGCA
CGGCACGGCG GCGATGCGGG CTGGCTGCGT GCCAGCCAGC GCCGGAGGCT CTTGCGCCAT
ATGGTGGCCG GTCGGCTCGA TCCCTTTGCC ATCGCCCCGA TCCTTGCGAC GCTGGAGCGG
GGCCTGGCCG AGGGGCGGGG ACTAGCACCC GCGCCGCCGC TCTGGAGCCG GTCTCCTCCT
CCGCCGTTCC GGCCCATGCC GCGCGCGGCG GCGACCGGGG AGCCGCTGTT TCTGGGCGGC
TGGCACTGGC AGGCGCCCGC CTTGCGCGCC GGCGCGGCGC GGGCCGTGGC CGAGGGGCGG
CCGGCGGCGC TGCTGCTGCT GACCCCCAGT TTCCTGCCGC ACCGGCTGAC CCTGACGGAC
GGCGGCTGGT GGGAGCAATG CGGCGGGCTT TGGGGCGCCT CGCAACCCGG CGATTCGCCT
GTGGTATTCC TGGGCAGGAA TGCGCGCATT CTGCGCGAAC GGGGAAATTT GCCTGGACGG
CGGAGATGA
 
Protein sequence
MPPSGMPSTS IVVISRHRPQ ALARCLTALA AQTHPDFEIV LVADPASAGI RPDLPLKRLA 
FDRANVSAAR NEGLALAAGE VVLFIDDDAL AAPGWAAALA APLADPRVLA AAGFTRGPDG
LRWQVRAERI TRSGRTLPLN IAETTLLAPE KGNPVSTIGT NCGFRREALL AIGGFDPAFA
YYLDESDVNL RMAARFPQGL TAVVPEAEVI HGAAPGAGRG EAGVPGDLTV IGRSAAIFAA
RHGGDAGWLR ASQRRRLLRH MVAGRLDPFA IAPILATLER GLAEGRGLAP APPLWSRSPP
PPFRPMPRAA ATGEPLFLGG WHWQAPALRA GAARAVAEGR PAALLLLTPS FLPHRLTLTD
GGWWEQCGGL WGASQPGDSP VVFLGRNARI LRERGNLPGR RR