| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2268 |
|---|
| Symbol | |
|---|
| ID | 4579322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2267894 |
|---|
| End bp | 2268580 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639769598 |
|---|
| Product | rpsU-divergently transcribed protein |
|---|
| Protein accession | YP_916056 |
|---|
| Protein GI | 119385000 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5590] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02396] rpsU-divergently transcribed protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.241057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.340557 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGATG AACGCGAGCG GCTGATCGAG GCCGCCTTGT CGCATGTCAT CTTCGAGGGC
ATGGGCGAAA AGGCCATCGC CGAGGGCGCG CGCGACATCG GCATGAACCC GGCGCTGGCG
CGGGTGTATC TGCCGCGCGG CGGGGCGGAT CTTGCCGCCG CCTATCATCG CAAGGGCGAT
GCGGCACTGC GCGACTGGCT GGCGGCGCAC CCGCCCGAGG GACGGTTCCG CGACCGTATC
TCGGCGGCGG TGATGCATCG GCTGTCGCTC AGCAACCGCG AGCTTGCCCG CGCGGGCGCG
GCGATCCTGG CCTTGCCGCA GAACGCCGCG CTTGGCGCAC GGCTGGTCTG GGAGACGGCC
GACGCGATCT GGGACGGGCT CGGCGACCGC TCCGAGGACG TGAACTGGTA TTCCAAGCGC
GCGACACTGT CGGCGGTCTA TGGCGCGACG GTGCTTTACT GGCTGGGCGA CGATTCGCCC
GAGGCCGACG AGACGCGCCG CTTCCTGGAC CGCCGCATCG AAGGCGTGAT GCGTTTCGAA
AGCTTCAAGG AACGGGTCGG GGGCCTGCCC GGCGTCTCGA TGCTGGCCGG CCTTGCAACG
GGCTGGATCA AACGGCCGGA AAATCGCAAT CTGCCCGGAG AGTTGCGCGC AACTTCGCGC
GCCCGGACAG AAGGAGGCGA CGGGTGA
|
|---|
| Protein sequence | MTDERERLIE AALSHVIFEG MGEKAIAEGA RDIGMNPALA RVYLPRGGAD LAAAYHRKGD
AALRDWLAAH PPEGRFRDRI SAAVMHRLSL SNRELARAGA AILALPQNAA LGARLVWETA
DAIWDGLGDR SEDVNWYSKR ATLSAVYGAT VLYWLGDDSP EADETRRFLD RRIEGVMRFE
SFKERVGGLP GVSMLAGLAT GWIKRPENRN LPGELRATSR ARTEGGDG
|
|---|
| |