| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2259 |
|---|
| Symbol | |
|---|
| ID | 4579313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2260568 |
|---|
| End bp | 2261188 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639769589 |
|---|
| Product | ribonuclease T2 |
|---|
| Protein accession | YP_916047 |
|---|
| Protein GI | 119384991 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG3719] Ribonuclease I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.291915 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.211367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTGT CCGCGCTGAT CGCCCTTCTG CTGCTTGCCC CCGCCGCCCT CGCCCAGGAC
GTCGCGGGAC GGTTCGACTA TTACGTCCTG TCGCTGAGCT GGTCGCCCAG CTGGTGCCGG
ACCGAGGGCG ACGCCGAGCA ATGCGCGACC GGGCGGCGGC TGGGCTTCGT GGTCCACGGC
CTTTGGCCGC AATACGAACG CGGCTGGCCC GAGCATTGCC GGACCGACGC CCGCGATCCC
TCGCGCCGCG AAACGCGAGC CATGACCGAT GTGATGGGAT CGGGCGGCCT GGCCTGGTAT
CAGTGGAAGA AGCACGGCCG TTGCTCGGGA CTGTCGGCGC ATGATTATTT CGCCCTGACC
CGCGAGGCCG CCAACCGGAT CGCCCTGCCC GATATCCTGC ACCGGCTGAA CCGGGACGCG
ACCCTGCCCG CCCGCGTGAT CGAGGACGCC TTCATCGAGG CCAACCCCGC GCTTGCACGG
GACGGCATCA CCGTGACTTG CCGCGACCGC GCCCTGCAAG AGGTGCGCAT CTGCCTGACC
CGCGACCTCC GGCCCCGTGC CTGCGCGGCG GATACCCGGC GCGATTGCTC GGGCAGCTTC
CTGATGCCGG CGCCACGCTG A
|
|---|
| Protein sequence | MRLSALIALL LLAPAALAQD VAGRFDYYVL SLSWSPSWCR TEGDAEQCAT GRRLGFVVHG
LWPQYERGWP EHCRTDARDP SRRETRAMTD VMGSGGLAWY QWKKHGRCSG LSAHDYFALT
REAANRIALP DILHRLNRDA TLPARVIEDA FIEANPALAR DGITVTCRDR ALQEVRICLT
RDLRPRACAA DTRRDCSGSF LMPAPR
|
|---|
| |