Gene Pden_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2213 
Symbol 
ID4579189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2212915 
End bp2213805 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content69% 
IMG OID639769543 
Productprolipoprotein diacylglyceryl transferase 
Protein accessionYP_916001 
Protein GI119384945 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0682] Prolipoprotein diacylglyceryltransferase 
TIGRFAM ID[TIGR00544] prolipoprotein diacylglyceryl transferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.717518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCT TTCCCGACAT CTCGCCCGAG ATCTTCACGA TCCACCTGTT CGGCATGGCG 
CTTTCGCTGC GCTGGTATGC GCTGGCCTAT CTGGTCGGGC TGCTGATCGG CTGGCGCATC
ATCGTCGCGC TGATGCGGCG CCCGCGGCTT TGGGGCGCCG ATGCGCCGAT GCGTCCCGAG
CGGGTCGAGG AATTGCTGAC CTGGGTGATC GCCGGCGTGG TGCTGGGCGG GCGGCTGGGC
TTCGTGCTGT TCTACGAGCC GGCCTATTAC CTGGCCAATC CGGGGCAGAT CCCGGTGATC
TGGCAGGGCG GCATGTCCTT TCACGGCGGC TTCCTGGGCG TGGTGCTGGC CTCCTGGTGG
TATTGCCGCC GCCACGGCAT TCCGGCGCTG CGGCTGGCCG ATGCGCTGTC GGTGGCGACG
CCGATCGGGC TGGGTCTTGG CCGGATGGCG AATTTCATCA ATGCCGAACT GTGGGGCCGG
CCGACCGATG CGCCCTGGGG CGTGATCTTT CCTGGCGAGG CGGCGCAGAA CTGCCCCGGC
ATCGCCGGCC CCTGCGCCCG TCATCCCAGC CAGCTTTACG AGGCGGGGCT GGAGGGCGTG
CTGCTGGCCG GTGCGCTGTT CCTGCTGGTC CGCGCCGGGG GCCTGCGCCG TCCGGGGCAG
GCGCTGGGGA TATTCCTGAT CGGCTACGGC CTGTCGCGTT TCGTCGTCGA GTTCTTCCGC
CAGGCCGATG CGCAGTTCAT CACGCCCGAC AATCCGCTGG GCCATGTGCT GGGCGGGCCG
GCCTGGGGCG TGACCATGGG CCAGCTTCTG TCGCTGCCGA TGGTGCTGGT CGGGCTGGCC
TTCCTGATTC GCGCGCGCAT GCGGCCGGCC GTGCCGCAGA CGGCCGCATG A
 
Protein sequence
MIPFPDISPE IFTIHLFGMA LSLRWYALAY LVGLLIGWRI IVALMRRPRL WGADAPMRPE 
RVEELLTWVI AGVVLGGRLG FVLFYEPAYY LANPGQIPVI WQGGMSFHGG FLGVVLASWW
YCRRHGIPAL RLADALSVAT PIGLGLGRMA NFINAELWGR PTDAPWGVIF PGEAAQNCPG
IAGPCARHPS QLYEAGLEGV LLAGALFLLV RAGGLRRPGQ ALGIFLIGYG LSRFVVEFFR
QADAQFITPD NPLGHVLGGP AWGVTMGQLL SLPMVLVGLA FLIRARMRPA VPQTAA