Gene Pden_2195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2195 
Symbol 
ID4579171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2199445 
End bp2200671 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content76% 
IMG OID639769525 
Producthydroxypyruvate reductase 
Protein accessionYP_915983 
Protein GI119384927 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2379] Putative glycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0384418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGC GCGACCGTGC GATGGCGTTG ATCCGCGCCG GCATCGCTGC AGCCGATCCG 
GGGGCGGCGG TGGTGCGCGG CATGGGCGAA GTGCTGGCCG ATCCGCCGGG GCCGGGCGGG
CGCTGGCTGG TGATCGCGCT GGGCAAGGCC GCCCGGGCGA TGGCCGGGGC GGCGCTGGAG
GCGCTGCCGG GGGCCGAGGC ACTGGTGGTG ACCAATGCCG GCAACGACGC GGCGCTGGCG
GGTGCGCGGG TCATGCGTGC CGGCCATCCG CAACCCGACG CGGATGGCGC GGCAGCCGCC
GAGGCGGTGA TCGCCATGCT CTCGGCCAGC GGGCCGCAGG ACCGGGTGCT GGCGCTGATC
TCGGGCGGCG GCTCGGCGAT GCTGCCGGCG CCGGCCGAGG GCATGACGCT GGCCGACAAG
CAGGCGGTGA ACCGGCTGCT TCTGGCCTCG GGGGCGGATA TTGCGCAGGT GAACCTGATC
CGCCAGGGCC TGTCGCGGCT CAAGGGCGGC GGCTGGCTGC GGCTGTCGCG GGCGCCGCTG
ACGGCGTTGA TCCTGTCGGA CGTGCCGGGG GACGACCTGC GGGTCATCGC TTCGGGGCCG
ACGGTGGCGC CGGTCGGCAC GCGCGCGCAG GCTGCCGATC TGGCGCAATC GCTGGGCATC
TGGGAGCGGA TGCCCGAGGC GGCGCGGGCA GCGCTGCTTC GCCCCGAGGA TCGCCGCGCC
TTGCCGCGGG CCAGGAACAT CCTCGTCGGC TCGAACGCGC TTTCGGTCGC GGCCATGGTC
GAGGCGGGGG CCGATCCCGC GCCGATCCCG CTTGAGGGCG ACGTGCAGGA TTGCGCGCGG
GCGATCTGGG CGCTGGCGTC GGGGTTGCGG TCCGGCCAGG CGCTGGCCTT TGGCGGCGAG
ACGACGGTGA AGCTGGTCGG CGACGGCATG GGCGGGCGCA ACCAGGAACT CGCCTTGCGC
CTGGCGCTGC TGGCCGAGGC GCAGCCGGTG GATTTCGACT GGGCTTTTGC CTCGGTCGGC
AGCGACGGGC GCGACGGCCC GGGCGAGGCG GCGGGCGGGC TGGTCGGTCC CGGCACGCCG
GCGGCGATCC GGGCGGGCGG CATCGATCCC GCAGCGGCGC TGGCCAGGAA CGATTCGACT
CCGGCGCTGG CGGCCGGCGA TGCGCTGGTG GTGACCGGCG CCACCGGCAC CAATGTCGCC
GACCTGGCGG TGCTGGTCCG CGCCTGA
 
Protein sequence
MAPRDRAMAL IRAGIAAADP GAAVVRGMGE VLADPPGPGG RWLVIALGKA ARAMAGAALE 
ALPGAEALVV TNAGNDAALA GARVMRAGHP QPDADGAAAA EAVIAMLSAS GPQDRVLALI
SGGGSAMLPA PAEGMTLADK QAVNRLLLAS GADIAQVNLI RQGLSRLKGG GWLRLSRAPL
TALILSDVPG DDLRVIASGP TVAPVGTRAQ AADLAQSLGI WERMPEAARA ALLRPEDRRA
LPRARNILVG SNALSVAAMV EAGADPAPIP LEGDVQDCAR AIWALASGLR SGQALAFGGE
TTVKLVGDGM GGRNQELALR LALLAEAQPV DFDWAFASVG SDGRDGPGEA AGGLVGPGTP
AAIRAGGIDP AAALARNDST PALAAGDALV VTGATGTNVA DLAVLVRA