Gene Pden_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2154 
Symbol 
ID4579971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2155122 
End bp2155688 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content65% 
IMG OID639769484 
Producthypothetical protein 
Protein accessionYP_915942 
Protein GI119384886 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0961076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGG AACTTCACCG CATCTTCCTG GGCGACCAGG ACCTGGGCTT CGCCTGGGAG 
GTCTTTTTCC GCACTGTCAT CATCTATTTC TATACGCTGG CCCTGATGCG CTGGCTGGGC
GGGCGCACGG TGGCGCAGCT TTCCATCGTC GAGTTCCTGC TGGTCATCGC CATCGGCTCG
GCGGTGGGGG ATTCGCTGTT CTACCCGGAT GTGCCGCTGC TGCCCGCCAT GTTCGCGATC
TTCCTGGTCG CGGGCTTCAA CAAGCTGGTG GACGAGGCGA TTCTGTCCTC GGACCTGCTG
ACCCGGCTTT TCGAGGGCCG GCCGCGCATC GTCGTCACCG AAGGCCGGGT GCATGGCGAC
CGCCTGCGCC GGCAGGGCAT CGGCATGAAC GAGCTTTACC TGAAGCTGCG CGAAAGGGGC
GTGACCGATC TTTCCGAGGT CAAGTTCGCC ATCCTCGAGG CGAACGGCTC GCTTTCGGTG
CTGAGGCGGG GTCAGGAGGG CGCGGCCGGG CTTTACCATC CGCCCGCCGT CCCGCAGCGG
GAACTGGCCC GCATGGGCAA ACCGTAA
 
Protein sequence
MLEELHRIFL GDQDLGFAWE VFFRTVIIYF YTLALMRWLG GRTVAQLSIV EFLLVIAIGS 
AVGDSLFYPD VPLLPAMFAI FLVAGFNKLV DEAILSSDLL TRLFEGRPRI VVTEGRVHGD
RLRRQGIGMN ELYLKLRERG VTDLSEVKFA ILEANGSLSV LRRGQEGAAG LYHPPAVPQR
ELARMGKP