Gene Pden_2147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2147 
Symbol 
ID4579964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2147412 
End bp2148212 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID639769477 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_915935 
Protein GI119384879 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGG CCACCGTCCT GGGCTGCGGC TCTTCGGGCG GCGTTCCGCG GCTGGGTAAT 
CGCTGGGGCG AATGCGACCC GGCCAATCCG CGCAACCGGC GCCGCCGCTG CTCGCTTCTG
GTCGAGCGTT TCGGCCATGA CGGGGCAACG CGGCTGTTGA TCGACACCGG CCCCGACCTG
GTGCCGCAAT TGCTGGATGC GGATGTCGCC GAACTGGACG CAGTCGCCTA TACCCATGCC
CATGCCGACC ATATCCACGG CATCGACGAC CTGCGGCAGA TCGTCTTCAA CATGCGCCGC
CGGATGCCGG TCTGGGCCGA CCAGCCGACC GCCGCCGCGC TGAAGACCCG CTTCGGCTAT
ATCTTCGAGA CGCCGCCCGG CTCTTCCTAT CCGCCGATCT GCGACATGCA ACCGATCCGC
GGTCCCTTCG CCATCGAGGG CGCGGGGGGC AGCATCGAAC TCGCCCCGTT CGAGGTCAAC
CACGGCGACA TGAACGCGCT CGGCTTTCGC ATCGGCGGGG TCGAGCAGAG CCTGGTCTAC
CTGCCCGACG TGCTGGCGAT CCCCGAGGAA GCCTGGAGCA CGATCATGGG CTGCGACGTG
TTCATCTGCG ACGCGCTGCG ACGCATCCCG CATCCCAGCC ACGCCCATCT GGCGCTGACG
CTGGAATGGA TCGCGCGTTC GGGCTGCGCG CGGGGCGTGA TCACCAACAT GCATGTCGAC
CTGGATTACG ACGCCGTCAT GCACGAGACG CCCGAGAATG TCGTGCCCGC CCATGACGGC
ATGCGGATCG AGCTGATATG A
 
Protein sequence
MIRATVLGCG SSGGVPRLGN RWGECDPANP RNRRRRCSLL VERFGHDGAT RLLIDTGPDL 
VPQLLDADVA ELDAVAYTHA HADHIHGIDD LRQIVFNMRR RMPVWADQPT AAALKTRFGY
IFETPPGSSY PPICDMQPIR GPFAIEGAGG SIELAPFEVN HGDMNALGFR IGGVEQSLVY
LPDVLAIPEE AWSTIMGCDV FICDALRRIP HPSHAHLALT LEWIARSGCA RGVITNMHVD
LDYDAVMHET PENVVPAHDG MRIELI