Gene Pden_2145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2145 
Symbol 
ID4579962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2145508 
End bp2146605 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content72% 
IMG OID639769475 
ProductDNA polymerase III subunit delta' 
Protein accessionYP_915933 
Protein GI119384877 
COG category[L] Replication, recombination and repair 
COG ID[COG0470] ATPase involved in DNA replication 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAT CCGAGATGAG CGACGCGCCG CTTCCCGAAC CCGACCGCGT CCCCGGTGCC 
CCGCACCCAC GCGATGCGGC GCGCATCATC GGTCAAGACG CCGCGGTGGC GGACTTCCTG
GCCGCCGCCC AGGCGCATCG CCTGCACCAT GCCTGGCTGA TCTCGGGACC GCGCGGCACC
GGCAAGGCCA CCCTGGCGTG GAACATCGCG AAATGGCTGC TCAGCGGCGC CGGCACGCCC
GACCTGACCG TGCCGCCCGA CGATCCGACC ATCCGCCGCA TCCGCGCCTT GTCCGAACCG
CGGCTGCATC TGGTCCGCCG CCCCGTCGAT GAAAAGACCC TGCGCCTGCG CGCCGAGATC
ACCGTGGACG AGATCCGCCG CCTTCAGGGC TTTTTCCACA TGAGCGCGGC CGAGGGCGGG
CATCGCGTCG CCATCATCGA CGCCGCAGAC GAGATGAACC AGGCCGCCGC CAATGCGCTG
CTGAAGCTGC TGGAGGAACC GCCGCAGGCC TCGACCCTGC TCTTGGTCGC GCATCAGCCG
GCGCGGCTCT TACCGACCAT CCGTTCGCGT TGCCGCGAGT TGCGGCTGCA TCCGCTGAGC
CCCGAGGACA TGGGCCAGGT GCTGCACGAC CTTGGGCTCG ACCACGACGC GGCACGGCTC
TCGGCACTCT CGGGCGGCTC GATCGGCGAG GCGCTTCGGC TCGCCGGACA GGACGGGCTG
GCCGTCTATC AGCGCATCAC TGGGCTTTTT GCCGATTATC CGCGCATGGA CCGCCGCGCC
GCCGCCGCCT TGGCCGAGAT GGCCGCCGGC CGCGCGGGGG CCGAGGGCGA CCCCTTCGAC
CTGGTCGTGA CCCTGCTCGA CCGCTTCCTG ACCCGGGCCG CGCGCAGCGG CCTGCTGGGC
GCCCCCCTGC CCGAGGCGGC CGAGGGCGAG GCCGAGGTGC TCAGCCGCAT TTCCCCCGAC
CCGGCGGCGG CACGGCTTTG GGCGGCCGCC CAGGCCCAGC TTTCGGCGCG GGCCCGCGCC
GGGCGGGCGG TCAACCTTGA CCCTTCCGCG CTGGTGTTGG ATATGCTGAT CGGGCTTGCG
AACCAGCCTG CCGTCTGA
 
Protein sequence
MRKSEMSDAP LPEPDRVPGA PHPRDAARII GQDAAVADFL AAAQAHRLHH AWLISGPRGT 
GKATLAWNIA KWLLSGAGTP DLTVPPDDPT IRRIRALSEP RLHLVRRPVD EKTLRLRAEI
TVDEIRRLQG FFHMSAAEGG HRVAIIDAAD EMNQAAANAL LKLLEEPPQA STLLLVAHQP
ARLLPTIRSR CRELRLHPLS PEDMGQVLHD LGLDHDAARL SALSGGSIGE ALRLAGQDGL
AVYQRITGLF ADYPRMDRRA AAALAEMAAG RAGAEGDPFD LVVTLLDRFL TRAARSGLLG
APLPEAAEGE AEVLSRISPD PAAARLWAAA QAQLSARARA GRAVNLDPSA LVLDMLIGLA
NQPAV