Gene Pden_2112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2112 
Symbol 
ID4579909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2114592 
End bp2114870 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content68% 
IMG OID639769442 
Productflagellar hook-basal body complex protein FliE 
Protein accessionYP_915900 
Protein GI119384844 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.246253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCAC CGACATTTGC CGCCACCGCC TATGATCGCG CCCGCCATGC CGTCGCCCCG 
GCCCAGGGCC TGCCGCAAGG CGTGACCAAT GCCGCGGCCG ATTTCGCCCG GGTGATGGAG
CAGGTCGACC TGGACGCGGC CGGCGCCATG ACCGGGCAGA CCGACACCCA TGACCTGGTC
CACAGCATCG CACGGGCCGA GATCGCGCTC GAAACCGTGG TCGCCATCCG CGACAAGGTG
GTCGAGGCCT ATCAGGAAAT CCTGCGCATG CCGGTCTGA
 
Protein sequence
MISPTFAATA YDRARHAVAP AQGLPQGVTN AAADFARVME QVDLDAAGAM TGQTDTHDLV 
HSIARAEIAL ETVVAIRDKV VEAYQEILRM PV