| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2090 |
|---|
| Symbol | |
|---|
| ID | 4578954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2092962 |
|---|
| End bp | 2094764 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639769420 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_915878 |
|---|
| Protein GI | 119384822 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0662343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.183735 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTAA ATGATTTTCA CCGCAACTTT CGTTCCGATC TGCAGACCAT CATCGCCGAG
CGCGTAGAAG CCGGCGAAGG CCCATTTCCT TCGGATGAGC TCGTTTTTGC GGAAATGGTC
ATGGAGCATG TCGCAGAAAC CGGGATCTGC GAGGCACCAA CCGTTTGCCA CTGGAGCGGC
AAGGTCGGCA ACGCGAAACT CCGCATTACG GGCTATGCGC TCAGCTCTGA TGAAACGGCT
CTCGACCTCT TCGTGACCCA CTATTTCGGG ACCGAAGAAC TGAACGATCT CAGGGACTCG
GATGCCACCG CAACCGCAAG CGAAGGCGTT CGCTTTCTGT TTCGAGCGGC AAGCGGCAAC
CTCGATGCAA GGATCGATCC GACGCATCCG GTCAGGGATC TGGTTGCGAC CATTCGTTCT
CGCTGGGGCG ACATCGACCG ACTTCGTGTA TTCGTGATCA CGGATGGCAA GACCAAGACC
AAGCGGTTCT CGAACAAAGA GGTTCACCAG AAGATGGTGG CCGTCGAGGC CATGGATATG
GAGAGGCTGT TCCGCCACAC CGAGGGCAAA CCGCGAGACG AACTGGCCGT AAGTTTCGTC
CAGTCGATTG GTCGGGCGCT TCCCTGCGTA CATGTCCCAG ACCCTGACGC TGACTACGAG
TATGCCCTAA CTGCCATTCC CGGGCAGCTC ATTCGGGATC TCTATCTGCG CTACGGGACG
ACGCTGCTCG AAGCCAATAT TCGCACCTTT CTGGGGAACA AGCGCGCGGT CAACAAGGGC
ATCGTCGAAA CGCTGCGAAA GGAACCGGAG CACTTCCTCG CCTTCAACAA TGGCCTCGTG
CTTGTCTGCG ACGAAGCGGC CTTCGAGCGG ACCGAGGACG GGAATCTGGG CCTGTCCTTC
CTGAAGGGTC TGCAGATCGT GAACGGCGGC CAGACGACCT CGACCATCTA CTTCTCATCC
CGCGATGATC GCACGATCGA TCTCAGTCAT GTCATGGTCC CGGCCAAGAT CATCATCCTC
AAGGGATCGC AGGACGAAGC GCGCGAGAGA CTAATCAGCA ACGTGTCACG GTATGCGAAC
AGTCAGAACG CGGTGAAAAT GTCCGACTTG TCGGCGAACC GCCCGTTCCA TCGAGAGCTT
GAGAAACTCG CGAACGACAC CTGGTGCCCT GACGGTGCAA CGCGATGGTT CTACGAGCGT
GCAGCTGGCG CCTACAACGT CATGCTGCTG AGGGAAGGCA CCACGCCCGC GAAGAGGCGG
AACCTGAAAG AGATGGTCCC GCCGAAACGC AAGCTGACCA AGAACGACAT CGCGAAGTAC
CATGAAGCGT GGCGCGGCAA GCCGAACCAG GTCGCCATGG CTGGCGAGAA GAACTTCGCG
GCCTTCATGG CTGCACTCGA TGATGATCCG ACCATTGTCC CGAGCCCGCT CGATGCCCGT
TGGTATCGGG CGATGATCGC CAAGGTCATT CTGTTCAAGG CGATCGAGAG CATGATCAAG
ACGAAGGAGG CGAAAGAGGT GTTCCGCCAA GGATGGGTGA ACATCGCAAC CTACGTTGTG
TCGGTGGTCG CGGATCGACT CGGCGACAGG CTGGACCTCG AGCAGATCTG GATGCGACAG
GGTATTTCTG GCGGTCTGCG CGACCTGCTC TGGGACTGGG CCGTGGTCGT GAACGCCGAG
TTCAACAGGA TTGCCCCGGG CCAGCAGATT TCGGAAGTGG CGAAGCGTGC GGACACGTGG
GCTAAAGTCA GAGCGGCGGA CTACTCGCCT CATTCCTTGT CCATTCCTGA AATCAAGCAA
TAG
|
|---|
| Protein sequence | MSLNDFHRNF RSDLQTIIAE RVEAGEGPFP SDELVFAEMV MEHVAETGIC EAPTVCHWSG
KVGNAKLRIT GYALSSDETA LDLFVTHYFG TEELNDLRDS DATATASEGV RFLFRAASGN
LDARIDPTHP VRDLVATIRS RWGDIDRLRV FVITDGKTKT KRFSNKEVHQ KMVAVEAMDM
ERLFRHTEGK PRDELAVSFV QSIGRALPCV HVPDPDADYE YALTAIPGQL IRDLYLRYGT
TLLEANIRTF LGNKRAVNKG IVETLRKEPE HFLAFNNGLV LVCDEAAFER TEDGNLGLSF
LKGLQIVNGG QTTSTIYFSS RDDRTIDLSH VMVPAKIIIL KGSQDEARER LISNVSRYAN
SQNAVKMSDL SANRPFHREL EKLANDTWCP DGATRWFYER AAGAYNVMLL REGTTPAKRR
NLKEMVPPKR KLTKNDIAKY HEAWRGKPNQ VAMAGEKNFA AFMAALDDDP TIVPSPLDAR
WYRAMIAKVI LFKAIESMIK TKEAKEVFRQ GWVNIATYVV SVVADRLGDR LDLEQIWMRQ
GISGGLRDLL WDWAVVVNAE FNRIAPGQQI SEVAKRADTW AKVRAADYSP HSLSIPEIKQ
|
|---|
| |