Gene Pden_2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2087 
Symbol 
ID4578951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2087606 
End bp2089108 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content64% 
IMG OID639769417 
Producthypothetical protein 
Protein accessionYP_915875 
Protein GI119384819 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.777544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0799361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTAA GAAATGCTCC TCCTCATGCC GGGTCGATGC TCGAGTCCCT TCGGGGACTC 
GGCTACGCGC CTCCCACCGC ACTTGCCGAT CTGGTCGACA ATTCCATCGC CGCAAACGCG
CGCGATGTCG CCGTTCATCT TGAGTGGGCC GGTCCAGAGA GCTGGGTAAG AATCGTCGAT
GACGGCGACG GCATGGACGA CGCGGCTCTG GAGGCCGGCA TGCGCCTTGG CGCTCGCGAT
CCGAGAGCTG AACGCGCCGC CACCGACCTC GGGCGCTTCG GGCTGGGCCT GAAGACGGCC
AGCTTCTCTC AGGCTCGTCG CCTCACCGTC GCCAGTCGGA AGGGAGGTGG ACCGGTCGTC
TGCCTGCGTT GGGACCTCGA TCTCATCGGT CAGGAACCCG GGGCCGATTG GCCGCTCTTC
GAGGGACCGT CGCCGGGATC AGAGCATCTG CTCGCGCCGC TGGACCAGAT GGCCCACGGC
ACCGTCGTAC TCTGGGAGAA ACTGGACCGT ATCGTGACGG ATGGCTTCGC GGCCACCGAC
ATGATCGAGC TCGCGGATCG CGTGGAGGCG CATCTTGCGA TGACCTTCCA TCGCCTCATC
GATGGCCAAC TGCCCATGCT GCGCCTGTCG CTCAATGGCA GAGGATTGAA GCCTTGGGAT
CCGTACCTCA TCGGTCATCC CGGCAAGGCG CTCGAAAGCC CCGAGTATCG GATCCTCCAC
ACCACCGGTG TGACCGTGCA ATGCCACGTC CTTCCGCATC GCGACATGCT CAAGCCTGCC
GAGCAGGAAG CGGCGGCGGG GCCCGGAGGA TGGACGCAGC AGGAGGGCTT CTACGTCTAC
CGCAACAAGC GTCTCCTTCT CGCTGGGGGT TGGCTTGGCC TCGGCGATGG CGGCAAGCCA
TGGCCGCGCG ATGAGGCTCA CAGGCTAGCT CGTATCCGGC TCGACATACC GAACAGCGCG
GATGCCGATT GGAAGATCAA TGTCCTGAAA TCGACGGCCA GCCCCCCGGT GCGCTTGCGA
TCCCAGCTTC ATCGTCTCGC AACAGAAACA CGCGACACGG CGCGGCGGGT CTTCGCCCAC
CGGGGACACG TGACCCCGGC CTCAGGCACG CGCCCGAACA CAGTCGCCGA AGCCTGGCAA
GTGCGGCGTT CGGCACAAGG AACGTCTTAC CGGATCGCTC GTGACCATGA TCTTCTCGCC
TCGATCCTCG ATCGCGCCGG CCCACTCAAG CCCGACATCC TCGCTCTTCT GAGGCTGATC
GAAGAGACAG TGCCCGTGCA GCGTATCTGG CTGGATACGG CGGAAGACAA GGAGACGCCG
AGAACTGGTT TCACCGGAGC GGCCGAGAAC GAGGTGATGG AGACCCTGTC CTCGATGTTT
GAAGCACTGG TGAAGTTCCG CGGGCTCAGC CCGACCGAGG CGCGCGAGCG GCTCGGTCGT
ACGCCCCCAT TCGACCGGCA CCTCGACTTG GTTGCAGCCC TTGAAGCGAA AGACACGCAA
TGA
 
Protein sequence
MGVRNAPPHA GSMLESLRGL GYAPPTALAD LVDNSIAANA RDVAVHLEWA GPESWVRIVD 
DGDGMDDAAL EAGMRLGARD PRAERAATDL GRFGLGLKTA SFSQARRLTV ASRKGGGPVV
CLRWDLDLIG QEPGADWPLF EGPSPGSEHL LAPLDQMAHG TVVLWEKLDR IVTDGFAATD
MIELADRVEA HLAMTFHRLI DGQLPMLRLS LNGRGLKPWD PYLIGHPGKA LESPEYRILH
TTGVTVQCHV LPHRDMLKPA EQEAAAGPGG WTQQEGFYVY RNKRLLLAGG WLGLGDGGKP
WPRDEAHRLA RIRLDIPNSA DADWKINVLK STASPPVRLR SQLHRLATET RDTARRVFAH
RGHVTPASGT RPNTVAEAWQ VRRSAQGTSY RIARDHDLLA SILDRAGPLK PDILALLRLI
EETVPVQRIW LDTAEDKETP RTGFTGAAEN EVMETLSSMF EALVKFRGLS PTEARERLGR
TPPFDRHLDL VAALEAKDTQ