Gene Pden_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2063 
Symbol 
ID4578927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2069678 
End bp2070169 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content66% 
IMG OID639769393 
Productphage terminase large subunit 
Protein accessionYP_915851 
Protein GI119384795 
COG category[R] General function prediction only 
COG ID[COG4626] Phage terminase-like protein, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00150685 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCAGCAG CGCGTAAATC TGGTACCGCT CGGAAGGCAC CGGCGTGCCC GGTCACCGCC 
TATGCAAAGG CGGTCACCGG CGGCAAGATC ACCGCCGGCC GGCTGGTGAA GCTGGCCTGC
GCACGGCATC TGGAGGACCT GAAGACCGGC AAGACCCGCA GTCTCTCCTG GGACCGCGCC
GCCGCGCTGC ACGCGATCGA GTTTTTCAGC CATCTGCGGC ACTCGACCGG GGAATGGGCC
GGCCAGCCCT TTGTGCTGCA GCCATGGCAG CAATTCGTGG TCGGATCCGT CTTTGGCTGG
AAACGCGCTG ATGGGCTCAG GAGGTTCCGC ACTGCCTATG TCGAGGTGGC GCGCAAGAAT
GGCAAATCCG CGCTGCTCGC AGGCATCGCG CTCTACGCGC TGATCGCCGA TGGTGAGGCC
GGCGCGCATG TCTATGCCGC GGCGACCACC CGCGATCAGG CGCGCATCGT CTTCGGCGAC
GGGCATTTCT GA
 
Protein sequence
MAAARKSGTA RKAPACPVTA YAKAVTGGKI TAGRLVKLAC ARHLEDLKTG KTRSLSWDRA 
AALHAIEFFS HLRHSTGEWA GQPFVLQPWQ QFVVGSVFGW KRADGLRRFR TAYVEVARKN
GKSALLAGIA LYALIADGEA GAHVYAAATT RDQARIVFGD GHF