Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2054 |
Symbol | |
ID | 4578918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2061405 |
End bp | 2062328 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639769384 |
Product | hypothetical protein |
Protein accession | YP_915842 |
Protein GI | 119384786 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000013578 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000242077 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCAAAAT CACGCTCTTT GAGCACCACC CGTGAACAGA AAGAATTGCC GTTGAGAATC GCGGCAGAGC GGGAGGTTGA TGGGGTCGAA ATGGGCGTGC TGTCAAATGG CACGTCATAC CTGACGATCA GGGGGCTGGC GAGGATGTGC GGAGTAGATC ACTCCGTGAT TGTTCGTGTC ACTGATCAGC TTCTAAACGA CCCCGAAAAG CCACGCGCCC GTCAAATCAG AGAGTTGATC AAAGGCCAAG GTGGCAATGA TGGGATTGTG TTTTTCCCGG TCGAGAAGAA CGGGGTGCTC CATCACACAA TCCCGGACAC AGTATGTATG GCGATACTGG AGTATTACGC CTTCGAAGCA AGAGGCGGAG ACGGTCAGGC TCTCAAGGCA TATCGGGCGC TGGCGCGGAA AGGCTTCCGA GACTTCATCT ATGCGCAAGT CGGATACAAC CCAAGCGGCG CAGTTGATGT CGCATGGCAG CAGTATCAGG ACCGCGTGTC GTTGGTCTAT GATAATGTCC CGGCTGGATA TTTCTGTGTA TTCAAAGAAA TAGCGGAAAT GTTCGTTACC CTGCTGCAAA GCGGGGCGAA GCTTGGCAAC GGGTTCATCC CCGACATCAG CGTTGGGCAG GCTTGGGGAA AGCACTGGAC GGCGGACAAC CTAGACAATG TCTATGGGAT GCGGCGGCAG TTCCACCACA ACTACCCGGA CTATTTCCCG CAATCGGCAT CGAACCCGCA GCCAGCCAAC TGCTATCCCG ACGACGCCCT TCCAGAGTTC AGGCGCTGGA TGCGTGAGCA CTACCTTGCC AACGGGCTGC CAAAATACTT GGTATCGAAG GTAAAAGCAG GGCAATTGGA GGCACCCGCC GCTACAATCG CGGTGGAGGC ATTCAAGAAC CGATCACTCC CCGCCCCGAA ATAA
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Protein sequence | MAKSRSLSTT REQKELPLRI AAEREVDGVE MGVLSNGTSY LTIRGLARMC GVDHSVIVRV TDQLLNDPEK PRARQIRELI KGQGGNDGIV FFPVEKNGVL HHTIPDTVCM AILEYYAFEA RGGDGQALKA YRALARKGFR DFIYAQVGYN PSGAVDVAWQ QYQDRVSLVY DNVPAGYFCV FKEIAEMFVT LLQSGAKLGN GFIPDISVGQ AWGKHWTADN LDNVYGMRRQ FHHNYPDYFP QSASNPQPAN CYPDDALPEF RRWMREHYLA NGLPKYLVSK VKAGQLEAPA ATIAVEAFKN RSLPAPK
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