6 homologs were found in PanDaTox collection
for query gene Pden_2054 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008686  Pden_2054  hypothetical protein  100 
 
 
307 aa  641    Paracoccus denitrificans PD1222  Bacteria  decreased coverage  0.00000013578  unclonable  0.0000242077 
 
 
-
 
NC_011004  Rpal_4097  hypothetical protein  60.91 
 
 
309 aa  403  1e-111  Rhodopseudomonas palustris TIE-1  Bacteria  unclonable  0.000000000213061  n/a   
 
 
-
 
NC_007964  Nham_2360  hypothetical protein  60.06 
 
 
314 aa  387  1e-107  Nitrobacter hamburgensis X14  Bacteria  unclonable  0.0000000129808  n/a   
 
 
-
 
NC_011205  SeD_A0620  hypothetical protein  43.19 
 
 
307 aa  255  8e-67  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  decreased coverage  0.00146691 
 
 
-
 
NC_011729  PCC7424_2413  hypothetical protein  28.46 
 
 
283 aa  55.5  0.000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_3939  hypothetical protein  30.28 
 
 
259 aa  52.4  0.000009  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>