Gene Pden_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2023 
Symbol 
ID4580407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2031256 
End bp2031741 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content71% 
IMG OID639769352 
Productredoxin domain-containing protein 
Protein accessionYP_915811 
Protein GI119384755 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.388068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAATCG ACTGGCAGGC CGCCCATGAC GGCGGGCTGG CCAAGCTGGC GCCGACCGAT 
CCGACCCCGG TGCCCGCGAC CGCCTTCACC GACCCCGAGG GCGGCACGCA CAGCCTGGCC
GACTGGCAGG GCAAGGTGGT GCTGCTGAAC TTCTGGGCGA CCTGGTGCGC CCCCTGCCGC
GAGGAAATGC CCTCGCTCGA CGCGCTGCAG GCCGAGATGG GCGGCGAGGA TTTCGAGGTC
GTGGCCATCG CCGCCGGCCA CAACCCGCCC CCGGCGGTCA GGAAGTTCCT CGACGAAGAG
GGCATCACCC ACCTGCCCGT GCATCTCGAC CCGCGCCAGC AACTTGCGCG CGAGATGGGG
GTCATGGGCA TGCCGGTGAC CGTGCTGATC GACCGCGAGG GCAACGAGAT CGCCCGGCTG
ATCGGCGGCG CCGACTGGTC CTCGGAGGCG GCCAAGGAAC TGGTCAGGCA GGCGACAGCG
CCTTGA
 
Protein sequence
MEIDWQAAHD GGLAKLAPTD PTPVPATAFT DPEGGTHSLA DWQGKVVLLN FWATWCAPCR 
EEMPSLDALQ AEMGGEDFEV VAIAAGHNPP PAVRKFLDEE GITHLPVHLD PRQQLAREMG
VMGMPVTVLI DREGNEIARL IGGADWSSEA AKELVRQATA P