Gene Pden_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2014 
Symbol 
ID4580398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2020882 
End bp2021811 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content67% 
IMG OID639769343 
ProductABC transporter related 
Protein accessionYP_915802 
Protein GI119384746 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCGA TCATCGACAT CGACCATGTT TCCAAGCGCT ATGACAGCGG CACGGTTGCG 
CTGAACGACG TCTCGCTGCA GATCGACGAG GGCGAGATCC TGGCATTGCT CGGCCCGAAC
GGGGCGGGCA AGACCACGCT GATCTCGATC ATCTGCGGCC TCGTGGTGCC GACCGGCGGC
ACGGTCCGCG TCGGCGGCCA CGACATCCGC AAGGACTGGC GTGCGGCGCG CAAGCTCATC
GGTCTCGTCC CGCAGGAGAT CGCGCTGGAG CCCTTCGAGA GCGTCATCGA CTGCGTGCGC
TTTACCCGCG GTCTTTACGG CGAGCCGCCG GATGACGCTT ATATCGAGCG GCTGCTGAGC
AGCCTTGCGC TGTGGGACAA GCGCGAGGCC AAGACGCGTG AGCTGTCGGG CGGCATGAAG
CGGCGGGTGT TGATCGCCAA GGCGCTGTCG CACCGGCCCA AGGTGCTGTT CCTCGACGAG
CCCACCGCCG GGGTGGATGT GGCCCTGCGG CGCGAGATGT GGCAGGTGGT CCGGGAACTG
CGCGCCGAAG GCGTGACCAT CATCCTGACC ACGCATTACC TGGAGGAGGC CGAGGACATG
GCCGACCGCA TCGGCGTCAT CAACCGGGGC GAGCTTTTGC TGGTCAAGTC CAAGGACGAG
CTGCTGGGCG AGTTCGGCAA GAAGCACCTG ACCGTCTCGC TTTACGAACC GCTGCGGGCC
CTGCCTGCCG AACTGGCCGG GCGCGGGCTG GTCCTGTCCG CCGACGGGCG GGAGCTGGGC
TATGCCTACG ACACCCGGGC CGAGCGCACC GGCATCGCCC ATCTGCTGGC CGAACTGGCC
GAGCGCGGCA TCGCCGTGCG CGACGTCTCG ACCAAGCAGA GCAGCCTCGA AGAGATCTTC
ATGTCGCTGG TCGAGGAGGA AACCGCATGA
 
Protein sequence
MRPIIDIDHV SKRYDSGTVA LNDVSLQIDE GEILALLGPN GAGKTTLISI ICGLVVPTGG 
TVRVGGHDIR KDWRAARKLI GLVPQEIALE PFESVIDCVR FTRGLYGEPP DDAYIERLLS
SLALWDKREA KTRELSGGMK RRVLIAKALS HRPKVLFLDE PTAGVDVALR REMWQVVREL
RAEGVTIILT THYLEEAEDM ADRIGVINRG ELLLVKSKDE LLGEFGKKHL TVSLYEPLRA
LPAELAGRGL VLSADGRELG YAYDTRAERT GIAHLLAELA ERGIAVRDVS TKQSSLEEIF
MSLVEEETA