Gene Pden_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1939 
Symbol 
ID4581061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1938734 
End bp1939228 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content69% 
IMG OID639769260 
Producthypothetical protein 
Protein accessionYP_915728 
Protein GI119384672 
COG category[S] Function unknown 
COG ID[COG5488] Integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.341321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0211682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTATG CATGGCATGA TGCGGCCCCG GAGAATTCCG GGGCCGCATG CTTTCGGCTC 
GAGGTCTGGC CGCACCGCTC GCTGTCCCGC AAGGGCTTCG TCTGGGTGAT CGGCCTGACC
GCGACGGGTC TGGCGCTGCC CTTGCTGGCC GTGGTCGGCT CGAAGGTGCT CTGGGGGCTC
CTGCCCTTTG CGGCACTGGC GGTCTGGGGG CTGTGGCAGG GCATCGTCCG CAGCTACGGC
ACGGCGCGCG AGGTCATGCT GCTTGACCGC GACCGGCTGA TCCTGACCCG CAGCGACCCT
GGACGACCTG ATCGCATCTG GCAGACCAAC CCCTATTGGG TGCGCCTCGC CCTGCGCCAG
AACGGCCCGG TCGAGGATTA TCTGGTGCTG ACCGACGGCA AGCGCGAGGT CGAGTTGGGC
GCCTTCCTGG CACCCGAGGA GCGCATGGCG CTGCGCAACG ACCTGGCACG GCGGCTGGAA
GCGTTGCGGG GATAA
 
Protein sequence
MPYAWHDAAP ENSGAACFRL EVWPHRSLSR KGFVWVIGLT ATGLALPLLA VVGSKVLWGL 
LPFAALAVWG LWQGIVRSYG TAREVMLLDR DRLILTRSDP GRPDRIWQTN PYWVRLALRQ
NGPVEDYLVL TDGKREVELG AFLAPEERMA LRNDLARRLE ALRG