Gene Pden_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1932 
Symbol 
ID4580590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1928360 
End bp1929205 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content71% 
IMG OID639769252 
Producthypothetical protein 
Protein accessionYP_915721 
Protein GI119384665 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.828306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.011783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAAT TCCGACCCCT GATGGCTGCC GCGACGCTGA TCGTTCTGGG CGCAGGCCCG 
CTGATGGCCC AGCCCGCCCA GACCGACGCC CCGCCGCCGC CCGCACAGAT GGGACATCAT
GCCATGAAAC ATGCCGCCCC CTTCGCCAGG CTGACCGTGA CCGGCGCCGG CCAGGCCACG
ACCCAGCCCG ACATGGCGAC CATCACCCTG GGCGTCAGCA CCCGGGCCGC CACCGCCGCC
GAGGCCATGG CGCAGAATGC CGAGCAGCAG GCCAAGGTCA TCGAGACGCT GAAGGCCGAG
GGCATCGAGG CGCGCGACAT CCAGACCTCG GGGCTGAACC TGTCTCCGGT GATGGATTAC
TCGGACCAGG GTCAGCCGCC GAAGCTGACC GGCTACGGCG CGCAAAACAG CGTCACCGTG
CGGGTGCGCG ACATCGCGGG GCTCGGCCCG GTGCTGGACA AGCTGGTCGC CTCGGGCGCC
AATGAAATCA GCGGCATCGC ATTTTCGCGC GAGGACATGG CCGAGGCCGA GGATCAGGCC
CGGACCGAGG CCGTGGCCGA GGCACGCCGC CGGGCCGAGG TGATGGCCGA TGCGGCGGGC
ATGCGGCTTG GCCGGCTGCT GTCGCTGTCG GATGTGCAGA TGGGCGGCGG GCCGCGCCCG
ATGATGGCCA TGCGCGCCGA AGCCGCAAGC GCGGCCGATA CGCCCATCGA GGCGGGCGAA
CTGGCCGTCA GCGCCAATGT CACGGCGGTT TTCGCCATGC ACCCCGCCGA TGCGCCGGAA
GGCAGCGAGC CGCCGGCACC CGAGGGCGAG ACCACGGACG AACCCGTGGA AGCCCCGGCA
AACTGA
 
Protein sequence
MPQFRPLMAA ATLIVLGAGP LMAQPAQTDA PPPPAQMGHH AMKHAAPFAR LTVTGAGQAT 
TQPDMATITL GVSTRAATAA EAMAQNAEQQ AKVIETLKAE GIEARDIQTS GLNLSPVMDY
SDQGQPPKLT GYGAQNSVTV RVRDIAGLGP VLDKLVASGA NEISGIAFSR EDMAEAEDQA
RTEAVAEARR RAEVMADAAG MRLGRLLSLS DVQMGGGPRP MMAMRAEAAS AADTPIEAGE
LAVSANVTAV FAMHPADAPE GSEPPAPEGE TTDEPVEAPA N