Gene Pden_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1868 
Symbol 
ID4579127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1866682 
End bp1867668 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content73% 
IMG OID639769189 
ProductBeta-N-acetylhexosaminidase 
Protein accessionYP_915661 
Protein GI119384605 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0376084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.8886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCG CCACCATCCT CGGCGGCATC GCCGGCCCGG ACCTGAGCCG GGCCGAGCGC 
GATTTCTTCC GCGCCGCCGA CCCTTGGGGC TTCATCCTGT TTGCGCGCAA CGTCGATGCG
CCGGATCGCC TGCGCCGGCT GGCCGCCGAA TTGCGCGAAG CGGTGGGCCG CGATGCCCCG
GTGCTGATCG ACCAGGAGGG GGGGCGCGTC CAGCGTATGC GCGCGCCGCA TTGGACCGAC
TGGCCGGCGC CGCTGGACCA GGCGGGGCGC GGCGAACGTG CGGTCTGGCT GCACCACTAC
CTGCTGGCGC AGGAATTGCG CGCCGTCGGC ATCGACGCCG ATTGCGCCCC GGTGCTGGAT
ATCGCGCGCG AGGACACCCA TCCCTTCCTG AGGAACCGCT GCCTCGGCTC GGATGCCGAT
ACGGTGATCC GGCTGGGCCG CGCCGCGGCG CAGGCCATGC TGGCCGCCGG CGTGCTGCCG
GTCGTCAAGC ACATGCCGGG CCATGGCCGG GCGCGGGTGG ACAGCCACAA GGACCTGCCG
GTGGTCGACA CGCCGCTGGA CGAGCTTCGC GCCGGCGATT TCGCCCCCTT CCGCGCGCTC
GCCGACCTGC CCATGGCGAT GACGGCGCAT ATTCGCTTTA CCGCCATCGA CGACGCGCCC
GCCACTGCCT CGGCCCCGGT GATCCGGATG ATCCGGCGCG AGATCGGTTT CGACGGGCTG
CTGATGTCCG ACGATATCGG CATGCAGGCG CTGTCGGGCA GCCCGGCCGA ACGGGCCGCG
GCCACCATCG CCGCCGGTTG CGACCTGGTG CTGTCCTGCA ACGAGACGCC GGCGCAGATG
GAAGAGATCG TCGCCGCCGC CGGAAGCATG AGCCCGCGCG CGACGGAGCG GGGGCAGGCG
GCGCTGGCCC TGCGCCGCGC GCCGGTTCAG GACGATATCG CCGCATTGAG GGCCGAACTG
GCGGCGCTTG GCGGGCTGGC GGCCTGA
 
Protein sequence
MTSATILGGI AGPDLSRAER DFFRAADPWG FILFARNVDA PDRLRRLAAE LREAVGRDAP 
VLIDQEGGRV QRMRAPHWTD WPAPLDQAGR GERAVWLHHY LLAQELRAVG IDADCAPVLD
IAREDTHPFL RNRCLGSDAD TVIRLGRAAA QAMLAAGVLP VVKHMPGHGR ARVDSHKDLP
VVDTPLDELR AGDFAPFRAL ADLPMAMTAH IRFTAIDDAP ATASAPVIRM IRREIGFDGL
LMSDDIGMQA LSGSPAERAA ATIAAGCDLV LSCNETPAQM EEIVAAAGSM SPRATERGQA
ALALRRAPVQ DDIAALRAEL AALGGLAA